Sequence detailsbmy_16264 (Coding sequence)

Part of scaffold_1268 (SequenceType object (1))

For more information consult the page for scaffold_1268 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SYDE2ENSTTRG00000001326 (Bottlenosed dolphin)

Gene Details

synapse defective 1, Rho GTPase, homolog 2 (C. elegans)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000001246, Bottlenosed dolphin)

Protein Percentage 97.01%
cDNA percentage 98.46%
Ka/Ks Ratio 0.60577 (Ka = 0.013, Ks = 0.0215)

SYDE2ENSBTAG00000003444 (Cow)

Gene Details

rho GTPase-activating protein SYDE2

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000004474, Cow)

Protein Percentage 90.86%
cDNA percentage 93.12%
Ka/Ks Ratio 0.28796 (Ka = 0.0453, Ks = 0.1573)

SYDE2 (Minke Whale)

Gene Details

synapse defective 1, Rho GTPase, homolog 2 (C. elegans)

External Links

Gene match (Identifier: BACU004609, Minke Whale)

Protein Percentage 99.11%
cDNA percentage 99.34%
Ka/Ks Ratio 0.32408 (Ka = 0.0037, Ks = 0.0114)

Additional orthologs identified in other species via the OPTIC pipeline.

SYDE2 (Human)   Syde2 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 4374 bp    Location:479376..518370   Strand:+
Raw sequence 
>bmy_16264
ATGCGCTCTGCGGCGCCGCCGCCCTCCCCCACCCGTCCCGTGGCAGAGTTATGCCAAGAATGTGAGGAGCCCGCGAGGGCCAGTGTAGGTCATGGGGAGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCGAGCGCGGCTTTCTCCCGAGCGGGGCTCCGAGCTCTCCCCGCACCAGGGGCGAGCCTGGCTGCTGAGGCGGAGGGGGATGACGGACCCTTTGAGGAGGACGCTGTCCAGGCTCCGGGGGAGGCGGGGTCCTCGCGCCGCCGGGGGGCCCGGGCGCCGGGCGGCCGCAGCAGCCACCGTGGCGGCCTCTTCGGCTGCCGAGGGAGACGCCGGGGGTGCTCCGGGCGGGCCCCTACGGGAGCGCGCCAGCGGAGCCCGGCCGAGCCTGGAGCGACCGCCGCCGTCGCCTCAGGCGTGGGGTCCTGAGGCGCGGGTCCCGGGAGGGCGGCCGGAGAGGTCGGGGGCGCTCGGGCCTCGGCCGCGCGTCGGGAAGGAGGCTGCACCCCCGGGCCGCGGGCTCACTCGCGCCTCTCTGTACGCTCCGCCGGGCTCCGAGGGCAGCGGAGAGGACGAGGAGGACGACGCCGACTACTACGAGAACCTGCCCGGCGGCTCCCAGCCCGCGCCGGAGCCTGAGGGGGCGGAGGCGGAGCGGTGGCCCCCGCCTCCCCCGGCCGCTGGCTCCTCCCCAGGGGCGGAGGGCGGCCGTCTGGAGACAGGCAGGCTGCAGACCCAGTTGCGAGAGGCCTATTATCTGCTGATCCAGGCCATGCACGACCTGCCCCCTGACTCGGGCAGGCGGCAGGGCGACCGGGGCAGGGCGGATCGCGGCTGCCCTGCGGGAGCCCGGGCTCCGGGCCAGCCGCCTTCCCCCTGCGGCGCGGCGGCCCGCCGAGCCTGCCCCCGAGACTGCGAGCGGGGAGGCGGCGGCCGCCCTTGGCAGCAGGTGTCCCCGCCCCGGTCGCCTCCGAAGGAGTCGGGGGGAGGCCGCCCGCGGACTCCTCGGATGCTGCTGTCCTGCAGCAGAAGCCTCGACAGCCTCCGCGTGGGTGCCAAGCCGCCTCCCTTACAGCGGTGGCGGAGCGACAGCTGGATCAGGTGCGGCGCGCGCGGGGAACCGGAGGAGCCCCCGCCACGTGGAGGCGGGATGGACGGCTGGAGCGGAGGCAGCTCCCGGGCCGCGGCGCCCTCCGGCCTCCGTACTCGCAGCTCCGAGGACCCCCGCCGCTCCTCGGGAAGCCGCGGCAAAGAAGACGGCCAGGAGGGGCTCCCCTTCCTCAAACCGCCCGCGGTGACAGTCAAGAAGCTGCAGAAGTGGATGTACAAAGGACGCCTGCTGTCCCTGGGAATGAAGGGTCGCGCTCGTAGGACACCCCCCGAAGTCACCCGAGCGCAGGCAACGTCTCCAAATCTGGGTGCTTTGAAAATGCGGGAAAGCCAAGTCGTCTCGGTGCCGCCAGACCAAAGAATTACGCTGACAGCTCTAAATTCTTCTGTTAGAAATTCTGCCATCGTGGCCCCAGAAGCAAACTTATTTGAAAATGTCTATGAGTCTTCAATGAAGAGAAGAGAACTTGAAGATCTGAATGATAATATTGGCTTCAGGGGTCATAAGCCACTTAATAGCATCACTGTGTCAAAGAAACGCAATTGGCTATATCAGAGTACTCTGAGATCTTTTAATTTGGAAGAAGAAAATAAGAAATGCCAAGATATAAGTCATTTATCCATCTCACCCGTTTCTCTACCTAAACTGCAGCTGTCACGACCTTTCCTCAAATCATCTGAAGAATATTGTACGTATATGGTGTGTAATGCTACAAATTCTTCATTATCAAGAAACTGTTCATTAGACTTTAATGAGGAAAATGATGCAGATGATGAAGGAGAAATATGGTACAACCCCATTCCTGAAGATGATGACTTTGGTATATCAAATGCCTTGAGTTTTGGGGAGGCAGACTCTGCTGTTCTGAAGTTTCCTGATGTCGGTTTGAGAGTATTATCTGGTAGTGACCTAACGAAAGGAGAGCAGCACACTGAAGACTTGCTGTGCTCTTCTGAACACACAGGCGATGTTCAGACCACACAGTCAAATGAAATAAATCCTATAGATTCCACCTATTCCACAGAGTTTGTGCAGCAGTACAAGCAAAGGCATGGACACAAGACACAAGAAGGTATAATAGTAGAGGAGAGTCCCATGTTGAGATCTCCTTTTGCAGGTCCTGGGATAGTAGCTGCTACAAATAAGCCTGATTTGGGAGTTACAGAACCATCTTCTACAAGCCCTAGCCCTGTGAAAAAAGGCAGTTCAATTCATTGGTCTTTCCCGGATAAAATAAAATCTCCACGAACTGTGAGGAAACTTTCCATGAAAATGAAAAGGTTGCCAGAATTTAGCCGGAAACTGAGTGTTAAAGGAACCTTGAATTATGGAAACAGTCCGGATAATACTCCTTCCTTGTCTAAATGTAACTGTCAAGAAATTCATCATGCTGTTATTCTACCTTCTGGGAACACAACCACAGCTGCTAAGAGGAATGTTATAAGCCGGTACCATCTTGATACTAGTGTGTCTTCTCAGCACAGCTACCAGAAGAAAACCTCTGTGAGTTCTAAGTATTCCTGCAAAAGTGGTTACCTCAGTGATGGAGATTCTCCTGAACTTATAGCTAAATCTAGCAAACATGGATGTGAAAACAAATTTGCAAAAGGAAAAGAAATAATTCCAAAYAGTTGCAGCAAGAATGAAATAGACATTGATGCTTTTAGACATTATAGCTTTTCTGATCAACCTAAGTGTTCTCAGTACATATCTGGGCTCATGAGTGTGCATTTCTATGGTGCTGAGGATTTAAAACCACCTCGGATAGATTCAAAAGATGTCTTTTGTGCAATTCAGGTAGATTCAGTAAACAAAGCCAGAACAGCTTTGCTCACATGTCGGACAACGTTTTTAGACATGGATCACACTTTCAACATAGAAATTGAAAATGCACAGCATTTGAAATTAGTAGTATTCAGTTGGGAACCCACTCCAAGAAAAAATCGAGTGTGTTGTCATGGAACTGTTGTTCTTCCCACCTTATTCAGAGTGACAAAGACACATCAGTTGGCTGTCAAACTTGAACCTAGAGGTCTTATTTATGTGAAAGTGACTCTTTTGGAACAGTGGGAGAATTCACTTCATGGACTAGATATAAATCGAGAACCAGTAATATTTGGTGTTGATATTCGAGAAGTTGTAGAGAAAGAAAATATAGGCTTGATGGTACCACTCCTGATTCAGAAATGTATTATGGAAATTGAAAAGAGAGGCTGTCAGGTAGTTGGCCTGTACCGATTATGTGGCTCGGCAGCAGTCAAGAAAGAACTTCGAGAGGCTTTTGAGAAGGATAGCAAAGCTGTTGGTCTGTGTGAAAGCCAATACCCAGATATAAATGTAATAACAGGTGTTCTTAAGGATTATTTAAGAGAACTTCCTTCTCCTCTGATAACAAAGCAACTTTATGAGGCTGTATTAGATGCAATGGCAAAAAATCCTTTGAAAATGTCATCAAATGGTTGTGAGAATGATCCAAGTGATTCTAAGTACACTGTTGACCTGCTGGATTGTCTGCCTGACGTTGAGAAGGCAACCCTAATGATGTTGTTGGATCATTTGAAATTGGTGGCTTCTTATCGTGACGTGAATAAGATGACTTGCCAGAATTTGGCTGTGTGCTTTGGACCCGTATTATTAAGTCAGAGGCAAGAGACTTCCACCCATAACAACAGAGTCTTCACTGATTCAGAAGAACTTGCAAGTGCTTTGGATTTTAAAAAACATATTGAAGTTCTTCATTACTTACTTCAACTCTGGCCAGTGCAACGTTTAACTATCAAAGAATCAGCAAACAATTTGTTCCCAGAGCACAAGTCTTCTCTAAATTATTTGAGGCGGAAGAAAGAACGACCTTACCTGTTAAATTTGAGTGGTACTGATTCATCAAGAGTACTTAGGCCAAGGCAAACCAGGTTAGACAGTCCACTAAGTAATCGTTATGCAGGAGACTGGAGCAGCTGTGGAGAAAACTACTTTTTAAATATGAAAGAAAATTTAAATGATGTGGATTATGACGATGTGCCTTCAGAAGACAGAGAAAATGGAGAAAACTGTAGCAAAATGTATGAACCAGATATCATGATTGAACAGCCAACTCCCACATCCAAAGAGTGCACATTTCAGACATATTTGACAATGCAGGCTATTGAGTCTAGGGACCRAAAAGTCAATCTCAAAGATCTACAAGAAAGTATCGATACTTTGATTGGAAATCTGGAGCGTGAACTCAACAAAAACAAGCTTAATATGAGTGTTTGA

Related Sequences

bmy_16264T0 SequenceType object (3)

Length: 1458 aa      View alignments
>bmy_16264T0
MRSAAPPPSPTRPVAELCQECEEPARASVGHGEPPPPPPPPPPRARLSPERGSELSPHQGRAWLLRRRGMTDPLRRTLSRLRGRRGPRAAGGPGRRAAAAATVAASSAAEGDAGGAPGGPLRERASGARPSLERPPPSPQAWGPEARVPGGRPERSGALGPRPRVGKEAAPPGRGLTRASLYAPPGSEGSGEDEEDDADYYENLPGGSQPAPEPEGAEAERWPPPPPAAGSSPGAEGGRLETGRLQTQLREAYYLLIQAMHDLPPDSGRRQGDRGRADRGCPAGARAPGQPPSPCGAAARRACPRDCERGGGGRPWQQVSPPRSPPKESGGGRPRTPRMLLSCSRSLDSLRVGAKPPPLQRWRSDSWIRCGARGEPEEPPPRGGGMDGWSGGSSRAAAPSGLRTRSSEDPRRSSGSRGKEDGQEGLPFLKPPAVTVKKLQKWMYKGRLLSLGMKGRARRTPPEVTRAQATSPNLGALKMRESQVVSVPPDQRITLTALNSSVRNSAIVAPEANLFENVYESSMKRRELEDLNDNIGFRGHKPLNSITVSKKRNWLYQSTLRSFNLEEENKKCQDISHLSISPVSLPKLQLSRPFLKSSEEYCTYMVCNATNSSLSRNCSLDFNEENDADDEGEIWYNPIPEDDDFGISNALSFGEADSAVLKFPDVGLRVLSGSDLTKGEQHTEDLLCSSEHTGDVQTTQSNEINPIDSTYSTEFVQQYKQRHGHKTQEGIIVEESPMLRSPFAGPGIVAATNKPDLGVTEPSSTSPSPVKKGSSIHWSFPDKIKSPRTVRKLSMKMKRLPEFSRKLSVKGTLNYGNSPDNTPSLSKCNCQEIHHAVILPSGNTTTAAKRNVISRYHLDTSVSSQHSYQKKTSVSSKYSCKSGYLSDGDSPELIAKSSKHGCENKFAKGKEIIPNSCSKNEIDIDAFRHYSFSDQPKCSQYISGLMSVHFYGAEDLKPPRIDSKDVFCAIQVDSVNKARTALLTCRTTFLDMDHTFNIEIENAQHLKLVVFSWEPTPRKNRVCCHGTVVLPTLFRVTKTHQLAVKLEPRGLIYVKVTLLEQWENSLHGLDINREPVIFGVDIREVVEKENIGLMVPLLIQKCIMEIEKRGCQVVGLYRLCGSAAVKKELREAFEKDSKAVGLCESQYPDINVITGVLKDYLRELPSPLITKQLYEAVLDAMAKNPLKMSSNGCENDPSDSKYTVDLLDCLPDVEKATLMMLLDHLKLVASYRDVNKMTCQNLAVCFGPVLLSQRQETSTHNNRVFTDSEELASALDFKKHIEVLHYLLQLWPVQRLTIKESANNLFPEHKSSLNYLRRKKERPYLLNLSGTDSSRVLRPRQTRLDSPLSNRYAGDWSSCGENYFLNMKENLNDVDYDDVPSEDRENGENCSKMYEPDIMIEQPTPTSKECTFQTYLTMQAIESRDXKVNLKDLQESIDTLIGNLERELNKNKLNMSV*