Sequence details bmy_16270 (Coding sequence)

Part of scaffold_1298 (Scaffold)

For more information consult the page for scaffold_1298 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SGTB ENSTTRG00000006543 (Bottlenosed dolphin)

Gene Details

small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006192, Bottlenosed dolphin)

Protein Percentage 95.31%
cDNA percentage 96.18%
Ka/Ks Ratio 0.42936 (Ka = 0.032, Ks = 0.0744)

SGTB ENSBTAG00000016902 (Cow)

Gene Details

small glutamine-rich tetratricopeptide repeat-containing protein beta

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022481, Cow)

Protein Percentage 92.71%
cDNA percentage 93.4%
Ka/Ks Ratio 0.3777 (Ka = 0.0525, Ks = 0.1389)

Additional orthologs identified in other species via the OPTIC pipeline.

SGTB (Human)   Sgtb (Mouse)  

Genome Location

Sequence Coding sequence

Length: 579 bp    Location:100599..90875   Strand:-
Raw sequence 
>bmy_16270
ATGCTCCTTATAATAAAAATCTCTTCTCTTTCTCTTAGGGCTGCTGCTCAGAGTAAATTAGGTCACTACACAGATGCAGTAAAGGATTGTGAAAGAGCAATAGCGATTGATTCAAAGTACAGCAAGGCCTATGGGAGAATGGGGCTGGCCCTCACTGCCATGAATAAATTTGAAGAAGCAGTTACAAGTTATCAGAAGGCATTAGATCTTGATCCTGAAAATGATTCCTATAAGTCAAATCTGAAAATAGCAGAACAGAAGTTAAGAGAGGTATCTAGTCCTACAGGAACTGGATTGAGTTTTGACATGGCCAGCTTAATAAATAATCCAGCCTTCATTAGTATGGCAGCAAGTTTAATGCAGAATCCTCAAGTTCAACAGCTAATGTCAGGAATGATGACAAATGCTATTGGGGGACCTGCTGCTGGAGTTGGGGGCCTAACTGACCTGTCTAGCCTCATCCAAGCGGGACAGCAGTTTGCTCAGCAGATACAGCAGCAGAATCCTGAACTTATAGAGCAACTTAGAAATCACATCCGGAGCAGGTCATTCAGCAGCAGTACTGAAGAACATTCCTGA

Related Sequences

bmy_16270T0 Protein

Length: 193 aa      View alignments
>bmy_16270T0
MLLIIKISSLSLRAAAQSKLGHYTDAVKDCERAIAIDSKYSKAYGRMGLALTAMNKFEEAVTSYQKALDLDPENDSYKSNLKIAEQKLREVSSPTGTGLSFDMASLINNPAFISMAASLMQNPQVQQLMSGMMTNAIGGPAAGVGGLTDLSSLIQAGQQFAQQIQQQNPELIEQLRNHIRSRSFSSSTEEHS*