Sequence details bmy_16278 (Coding sequence)

Part of scaffold_1263 (Scaffold)

For more information consult the page for scaffold_1263 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PCBD1 ENSTTRG00000005775 (Bottlenosed dolphin)

Gene Details

pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005455, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 98.4%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.0557)

PCBD1 ENSBTAG00000011866 (Cow)

Gene Details

Pterin-4-alpha-carbinolamine dehydratase

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015750, Cow)

Protein Percentage 99.04%
cDNA percentage 94.87%
Ka/Ks Ratio 0.02387 (Ka = 0.0046, Ks = 0.1924)

Additional orthologs identified in other species via the OPTIC pipeline.

PCBD1 (Human)   Pcbd1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 411 bp    Location:577197..582392   Strand:+
Raw sequence 
>bmy_16278
GCCCTAGCGCCGCCCCGCGCGACGGCTTCCCAGTGCGCTGGGCTTCTCGCTCGTCTGCTCCGCCGCCACCAGCTGCTGCTCGCGTCCGCGCCCGGCATGGCTGGCAAAGCACACAGGCTAAGTGCTGAGGAGAGGGACCAGCTGCTGCCAAACCTGCGGGCAGTGGGGTGGAACGAGCTGGAAGGCCGGGATGCCATCTTCAAGCAGTTCCATTTCAAAGACTTCAATCGGGCTTTTGGCTTCATGACAAGAGTGGCTCTTCAGGCTGAGAAATTGGACCACCATCCTGAATGGTTTAACGTGTACAACAAGGTCCACATCACCCTGAGCACTCATGAGTGTGCRGGCCTTTCAGAACGGGACATAAACCTGGCCAGCTTCATCGAGCAAGTAGCAGTGTCCATGACATAG

Related Sequences

bmy_16278T0 Protein

Length: 137 aa      View alignments
>bmy_16278T0
ALAPPRATASQCAGLLARLLRRHQLLLASAPGMAGKAHRLSAEERDQLLPNLRAVGWNELEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT*