Sequence details bmy_16287 (Coding sequence)

Part of scaffold_1294 (Scaffold)

For more information consult the page for scaffold_1294 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRIM39 ENSTTRG00000008274 (Bottlenosed dolphin)

Gene Details

tripartite motif containing 39

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007832, Bottlenosed dolphin)

Protein Percentage 88.19%
cDNA percentage 88.05%
Ka/Ks Ratio 0.09478 (Ka = 0.0012, Ks = 0.0126)

TRIM39-RPP21 ENSBTAG00000007643 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010056, Cow)

Protein Percentage 72.47%
cDNA percentage 76.1%
Ka/Ks Ratio 0.45374 (Ka = 0.2413, Ks = 0.5319)

Additional orthologs identified in other species via the OPTIC pipeline.

Trim39 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1425 bp    Location:63792..76597   Strand:+
Raw sequence 
>bmy_16287
ATGGCAGAGACAAGCCTGTTAGAGGCCGGGGCCTCTGCAGCCTCCACAGCTGCAGCTCTGGAGAACTTACAGGTGGAGGCAAGTTGCTCTGTGTGCCTGGAGTATCTGAAGGAGCCTGTCATCATTGAGTGTGGGCACAACTTCTGCAAAGCTTGCATCACTCGCTGGTGGGAGGACCTAGAGAGGGACTTCCCTTGTCCTGTATGTCGAAAGACGTCCCGCTACCGCAGTCTCCGGCCTAATCGACAGCTGGGCAGCATGGTGGAAATTGCCAAGCAGCTCCAGGCCGTCAAGCGGAAGATCCGAGATGAGAGCCTCTGCCCCCAGCACCATGAAGCCCTCAGCCTCTTCTGCTATGAGGACCAGGAGGCTGTGTGTTTGATATGTGCAATTTCCCACACCCACCGGGCCCACACCGTCGTGCCACTGGACGATGCCACACAGGAGTACAAGGAAAAACTGCAGAAGTGCCTGGAGCCCCTGGAGCGGAAGCTGCAGGAGATCACCCGCTGCAAGTCCTCTGAGGAGAAGAAGCCTGGGGAGCTCAAGAGACTAGTGGAGAGTCGTCGACAGCAGATCCTAAAGGAATTTGAAGAGCTTCATCGGCGGCTGGATGAAGAGCAGCAGGTGTTACTTTCACGACTAGAGGAGGAGGAACAGGACATTCTACAGCGCCTCCGAGAAAATGCTGCTCACCTTGGAGACAAGCGCCGGGACCTGGCCCACTTGGCTGCTGAGGATGTCAAAAGTACCCTGGAAAAATGTGAGAAGGTGAAGACCATGGAGGTGACTTCAGTATCCATAGAGCTGGAAAAGAACTTCAGCAATTTCCCCCGACAGTACTTTGCACTAAGGAAAATCCTTAAACAGCTAATTGCGGATGTGACCCTGGACCCTGAGACTGCTCATCCTAACCTAGTCCTGTCGGAAGATCGTAAGAGCGTCAAGTTCGTGGAGACAAGACTCCGGGATCTCCCTGATACACCACAGCGTTTCACCTTCTACCCTTGTGTCCTGGCTACTGAGGGTTTCACCTCAGGTCGACACTACTGGGAGGTGGAGGTGGGCGACAAGACCCACTGGGCAGTGGGTGTGTGCCGGGACTCTGTGAGCCGAAAGGGCGAACTGACCCCACTCCCTGAGACTGGCTACTGGCGGGTGCGGCTGTGGAACGGAGACAAGTATGCAGCCACCACCACACCTTTTACCCCTTTGCACATCAAGGTGAAACCCAAGCGGGTAGGCATATTCCTAGACTATGAGGCCGGTACACTGTCTTTTTACAACGTCACAGACCGCTCTCATATCTACACCTTCACTGATACTTTTACTGAGAAACTTTGGCCCCTCTTCTACCCAGGCATCCGGGCTGGTCGGAAGAATGCTGCACCACTTACCATCAGGCCCCCAACAGATTGGGAGTGA

Related Sequences

bmy_16287T0 Protein

Length: 475 aa      View alignments
>bmy_16287T0
MAETSLLEAGASAASTAAALENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLRPNRQLGSMVEIAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISHTHRAHTVVPLDDATQEYKEKLQKCLEPLERKLQEITRCKSSEEKKPGELKRLVESRRQQILKEFEELHRRLDEEQQVLLSRLEEEEQDILQRLRENAAHLGDKRRDLAHLAAEDVKSTLEKCEKVKTMEVTSVSIELEKNFSNFPRQYFALRKILKQLIADVTLDPETAHPNLVLSEDRKSVKFVETRLRDLPDTPQRFTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGVCRDSVSRKGELTPLPETGYWRVRLWNGDKYAATTTPFTPLHIKVKPKRVGIFLDYEAGTLSFYNVTDRSHIYTFTDTFTEKLWPLFYPGIRAGRKNAAPLTIRPPTDWE*