Part of scaffold_1294 (Scaffold)

For more information consult the page for scaffold_1294 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ABCF1 ENSTTRG00000008299 (Bottlenosed dolphin)

Gene Details

ATP-binding cassette, sub-family F (GCN20), member 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007864, Bottlenosed dolphin)

Protein Percentage 86.65%
cDNA percentage 88.92%
Ka/Ks Ratio 0.49904 (Ka = 0.0736, Ks = 0.1474)

ABCF1 ENSBTAG00000006927 (Cow)

Gene Details

ATP-binding cassette sub-family F member 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009098, Cow)

Protein Percentage 89.81%
cDNA percentage 89.18%
Ka/Ks Ratio 0.21069 (Ka = 0.0709, Ks = 0.3366)

ABCF1  (Minke Whale)

Gene Details

ATP-binding cassette, sub-family F (GCN20), member 1

External Links

Gene match (Identifier: BACU015920, Minke Whale)

Protein Percentage 98.83%
cDNA percentage 98.71%
Ka/Ks Ratio 0.15603 (Ka = 0.0043, Ks = 0.0275)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2658 bp    Location:134285..143270   Strand:+
>bmy_16291
TTCTTCGAAGAGCTGGCAGTAGAAGACAGACAGGCTGGGGAAGAAAAGAAAGTGCTCAAGGAGAAGGAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGTACAGATGTCCGGGCCCCACCGCTACATGGAGGCCTCCATGGGTCCGCCAGCTCCTCTGCAGCCCGCGCTGGGTCACTCAGCGGACGGGGAGCTCTCTCTGGAGCAGAGATACAGCAGCGGCCTGGGCTTCATTCTCTCACTGTTTGGCTTTCAGCAGCAAAAAAAGAAGCGAGACACTCGAAAAAGCCGTCGGAAAAAGGATGTGGATGATGACGGAGAGGAGAAGGAGCTCATAGAGCGTCTTAAGAAGCTCTCAGTGCCGGCCAGTGATGAGGAGGAGGAGGTACCTGCCCCAGTACCCCGAGGAGGGAAGAAAACCAAGGGTGGTAATGTTTTTGCAGCCCTGATTCAGGATCAGAGTGAGGAAGAAGAGGAGGAGGAAGAAAAACATCCTCCTAAGCCAGCCAAGCCAGAGAAAAATCGGATCAATAAGGCTGTATCTCAGGAACAACAGCCAGGGCTCAAGGGCAAAAAGGGAAAGGAGGAGAAGTCAAAGGGGAAAGCCAAGCCTCAAAATAAATTTGCTGCTCTGGACAATGAAGAGGAGGAGGATGAAGAGGAAATAACAGAAGAAGAGGAACCACCCAAGCAAGGGAAGGAGAAGGCCAAGAAGGCAGAGCAGGGCTCAGAGGAAGAAGGAGAGGAGGAGGAGGAAGAAGGGGAGTCCAAGGCTGATGATCCCTACGCTCACCTTAGCAAGAAGGAAAAGAAGAAACTGAAGAAACAGATGGAGTATGAGCGCCAGGTGGCTTCATTAAAAGCAGCCAATGCTGCTGAAAATGACTTCTCCGTGTCACAAGCAGAGGTGTCTTCCCGCCAGGCCATGTTAGAAAATGCATCTGACATCAAGCTGGAGAAGTTCAGCATCTCCGCCCACGGCAAGGAGCTGTTTGTCAACGCAGACCTGTACATTGTCGCCAGCCGCCGCTATGGGCTGGTGGGACCCAATGGCAAGGGCAAGACCACTCTCCTCAAGCACATCGCCAACCGAGCCCTGAGCATCCCTCCCAACATCGACGTGCTGCTCTGTGAGCAGGAGGTGGTAGCCGATGAGACACCGGCCGTGCAGGCTGTTCTCCGAGCCGACACCAAGCGCTTGAAGCTGTTGGAAGAGGAGCGGCAGCTTCAGGGACAGCTGGAGCAGGGCGATGACGCGGCTGCCGAGAGGCTCGAGAAGGTGTATGAGGAATTGCGGGCTACCGGGGCGGCAGCTGCAGAGGCCAAAGCCCGCCGGATCCTGGCTGGTCTGGGCTTTGACCCTGAGATGCAGAATCGACCCACACAGAAGTTCTCGGGGGGCTGGCGCATGCGCGTCTCCCTGGCCAGGGCGCTATTCATGGAGCCCACGCTGCTGATGTTGGATGAGCCCACCAACCACCTGGACCTCAACGCTGTCATCTGGCTCAATAACTACCTCCAAGGCTGGCGGAAGACGCTGCTCATCGTCTCCCATGACCAGGGCTTCCTGGATGACGTCTGTACCGATATCATCCATCTTGATGCCCAGCGGCTCCATTACTACAGGGGCAATTACATGACCTTCAAGAAGATGTAYCAGCAGAAGCAGAAGGAACTGCTGAAGCAGTATGAGAAGCAGGAGAAAAAGCTGAAGGAGTTAAAGGCGGGCGGCAAGTCGACCAAGCAGGCGGAAAAGCAAACAAAGGAAGCCCTGACTCGAAAGCAGCAGAAGTGCCGGAGGAAAAACCAGGATGAGGAGTCACAGGACGCCCCCGAGCTCCTGAAGCGCCCCAGGGAGTACACCGTGCGCTTCACGTTCCCTGACCCGCCGCCGCTCAGCCCTCCGGTGCTGGGCCTGCACGGTGTGACGTTTGGCTATGAGGGGCAGAAACCACTCTTTAAGAATCTGGATTTTGGCATTGACATGGACTCAAGGATCTGCATCGTGGGCCCTAACGGTGTGGGGAAGAGCACCCTGCTGCTGCTGCTGACAGGCAAGCTGACGCCGACTCGTGGGGAAATGAGGAAGAACCACCGGCTGGTAAGTGGCTTTGGGGATCAGGGAGTAAGAGGCCGACAGAGGAAGTATGACTTTGACCGACCACCTCCCTCTCCTCTCGGGCAGAAAATTGGCTTCTTCAACCAGCAGTACGCAGAGCAGCTGCACATGGAGGAGACGCCCACCGAGTACTTGCAGCGGGGCTTCAACCTGCCCTACCAGGATGCCCGCAAGTGCCTGGGCCGCTTCGGCCTGGAGAGTCACGCCCACACCATCCAGATCTGCAAACTCTCTGGTGGGCAGAAAGCCCGAGTTGTGTTTGCAGAGCTGGCCTGTCGGGAGCCCGATGTCCTCATCTTGGACGAGCCCACCAATAACCTGGACATTGAGTCTATCGACGCTCTTGGGGAGGCCATCAACGAATACAAGGGTGCTGTGATCGTCGTCAGCCATGATGCCCGACTTATCACAGAAACCAACTGCCAGCTGTGGGTGGTGGAGGAGCAGAGCGTTAGCCAGATCGATGGTGACTTCGAAGACTACAAGCGGGAGGTGTTGGAGGCCCTGGGTGAAGTCGTGGTCAACCGGCCTCGAGAGTGA

Related Sequences

bmy_16291T0 Protein

Length: 886 aa      View alignments
>bmy_16291T0
FFEELAVEDRQAGEEKKVLKEKEQQQQQQQQQQVQMSGPHRYMEASMGPPAPLQPALGHSADGELSLEQRYSSGLGFILSLFGFQQQKKKRDTRKSRRKKDVDDDGEEKELIERLKKLSVPASDEEEEVPAPVPRGGKKTKGGNVFAALIQDQSEEEEEEEEKHPPKPAKPEKNRINKAVSQEQQPGLKGKKGKEEKSKGKAKPQNKFAALDNEEEEDEEEITEEEEPPKQGKEKAKKAEQGSEEEGEEEEEEGESKADDPYAHLSKKEKKKLKKQMEYERQVASLKAANAAENDFSVSQAEVSSRQAMLENASDIKLEKFSISAHGKELFVNADLYIVASRRYGLVGPNGKGKTTLLKHIANRALSIPPNIDVLLCEQEVVADETPAVQAVLRADTKRLKLLEEERQLQGQLEQGDDAAAERLEKVYEELRATGAAAAEAKARRILAGLGFDPEMQNRPTQKFSGGWRMRVSLARALFMEPTLLMLDEPTNHLDLNAVIWLNNYLQGWRKTLLIVSHDQGFLDDVCTDIIHLDAQRLHYYRGNYMTFKKMYQQKQKELLKQYEKQEKKLKELKAGGKSTKQAEKQTKEALTRKQQKCRRKNQDEESQDAPELLKRPREYTVRFTFPDPPPLSPPVLGLHGVTFGYEGQKPLFKNLDFGIDMDSRICIVGPNGVGKSTLLLLLTGKLTPTRGEMRKNHRLVSGFGDQGVRGRQRKYDFDRPPPSPLGQKIGFFNQQYAEQLHMEETPTEYLQRGFNLPYQDARKCLGRFGLESHAHTIQICKLSGGQKARVVFAELACREPDVLILDEPTNNLDIESIDALGEAINEYKGAVIVVSHDARLITETNCQLWVVEEQSVSQIDGDFEDYKREVLEALGEVVVNRPRE*