Part of scaffold_1294 (Scaffold)

For more information consult the page for scaffold_1294 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MRPS18B ENSTTRG00000008313 (Bottlenosed dolphin)

Gene Details

mitochondrial ribosomal protein S18B

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007873, Bottlenosed dolphin)

Protein Percentage 96.51%
cDNA percentage 97.67%
Ka/Ks Ratio 0.40012 (Ka = 0.0164, Ks = 0.0409)

BT.88532 ENSBTAG00000006936 (Cow)

Gene Details

28S ribosomal protein S18b, mitochondrial

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009107, Cow)

Protein Percentage 94.19%
cDNA percentage 93.93%
Ka/Ks Ratio 0.24882 (Ka = 0.0348, Ks = 0.14)

MRPS18B  (Minke Whale)

Gene Details

mitochondrial ribosomal protein S18B

External Links

Gene match (Identifier: BACU019433, Minke Whale)

Protein Percentage 98.84%
cDNA percentage 98.97%
Ka/Ks Ratio 0.27518 (Ka = 0.0054, Ks = 0.0198)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 879 bp    Location:165811..172234   Strand:+
>bmy_16293
ATGCGCTGCCGCCTTCCGCACTGCGGGGTCGTCCTTGGCCCTACCCTAATCTATTTCCTGGAGCATGCGCAGTCGCTTTTCCTGCTTTGTGCGTATGTCAAGATGGCTGCCTCCACATTGAACGTGTTGCTGAGGCGCCTTCCAAGCATTTCGCCCTTCAGAGGTGCCTACGGAGTTCAGGTTCCCCTCCAGACTCTTTGCACCAAAGCCCCCCCTGAGGACGATTCTTTGCCCCCAGTTCCCGTTTCCCCTTATAAGGATGAACCCTGGAAATATCTGGACTCAGAAGAATACCAGAACCGCTATGGTTCTCGCCCTGTCTGGGCTGACTACCGTCGCAACCACAAAGGTGGAATACCCCCACAGCGGACTCGAAAGACATGTATTCGTGGAAATAAAATTGCTGGGAATCCCTGCCCCATCTGCCGGGATCAGAAGTTGCACGTTGACTTTAGGAATGTGAAGCTCTTGGAACAGTTTGTCTGCGCCCACACGGGTATCATCTTCCATGCTCCATATACAGGGGTCTGTATGAAGCAACACAAGAAGTTGACCCAGGCCATCCAGAAAGCCAGGGATCATGGTCTCCTCAGTTACCACATTCCCCAGGTTGAACCCCGGGACCCTGACTTCAGTACCTCTCATGGAGCTGTGAGTGCCACTCCGCCAGCTCCCACTCTGGTTTCAGGTGATCCCTGGTACCCATGGTACAGCTGGAAACAGCCACCAGACAGAGAGCTGTCCCGCCTTCGTCGGCTGTACCAGGGCCATCTCCGAGAAGAAAGTGGCCCTCCGCCWGAGTCAATGCCCAAGGTGCCCCGCACAGCCCCAGTTGAAGCCTCCTCCACTGAGCAGGCGGGCCCCCAAACTGCTCTGTAG

Related Sequences

bmy_16293T0 Protein

Length: 293 aa      View alignments
>bmy_16293T0
MRCRLPHCGVVLGPTLIYFLEHAQSLFLLCAYVKMAASTLNVLLRRLPSISPFRGAYGVQVPLQTLCTKAPPEDDSLPPVPVSPYKDEPWKYLDSEEYQNRYGSRPVWADYRRNHKGGIPPQRTRKTCIRGNKIAGNPCPICRDQKLHVDFRNVKLLEQFVCAHTGIIFHAPYTGVCMKQHKKLTQAIQKARDHGLLSYHIPQVEPRDPDFSTSHGAVSATPPAPTLVSGDPWYPWYSWKQPPDRELSRLRRLYQGHLREESGPPPESMPKVPRTAPVEASSTEQAGPQTAL*