Sequence details bmy_16300 (Coding sequence)

Part of scaffold_1294 (Scaffold)

For more information consult the page for scaffold_1294 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TUBB ENSTTRG00000008946 (Bottlenosed dolphin)

Gene Details

tubulin, beta class I

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008482, Bottlenosed dolphin)

Protein Percentage 83.53%
cDNA percentage 90.94%
Ka/Ks Ratio 0.43565 (Ka = 0.079, Ks = 0.1813)

TUBB5 ENSBTAG00000006969 (Cow)

Gene Details

Tubulin beta-5 chain

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009158, Cow)

Protein Percentage 99.77%
cDNA percentage 95.87%
Ka/Ks Ratio 0.001 (Ka = 0.0002, Ks = 0.226)

Additional orthologs identified in other species via the OPTIC pipeline.

Tubb5 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1335 bp    Location:236625..240220   Strand:+
Raw sequence 
>bmy_16300
ATGAGGGAAATCGTGCACATCCAGGCCGGTCAGTGTGGCAATCAGATCGGTGCCAAGTTCTGGGAGGTGATCAGTGATGAACATGGCATCGACCCCACCGGCACCTATCATGGGGATAGCGACCTGCAGCTGGACCGCATCTCCGTGTACTACAATGAAGCCACAGGTGGCAAATATGTTCCTCGTGCTATCTTGGTGGATCTAGAGCCTGGGACCATGGACTCTGTTCGCTCAGGGCCTTTTGGTCAGATCTTCAGACCAGACAACTTTGTTTTTGGTCAGTCTGGGGCAGGCAACAACTGGGCCAAGGGCCACTATACAGAGGGGGCCGAGCTGGTTGACTCGGTCCTGGATGTGGTTCGGAAGGAGGCTGAGAGCTGTGACTGCCTGCAGGGCTTCCAGCTGACCCACTCACTGGGCGGGGGCACCGGCTCTGGAATGGGCACCTTGCTCATCAGCAAGATCCGTGAAGAGTATCCTGACCGCATCATGAACACCTTCAGTGTGGTGCCCTCACCCAAAGTGTCCGACACTGTGGTTGAGCCCTACAATGCCACCCTCTCCGTCCATCAGCTGGTGGAGAACACTGATGAGACCTACTGCATTGACAACGAGGCCCTTTACGACATCTGCTTCCGCACCCTCAAGCTGACCACGCCAACCTACGGGGACCTGAACCACCTCGTCTCGGCCACCATGAGTGGTGTCACCACCTGTCTCCGCTTCCCTGGCCAGCTCAATGCTGACCTCCGCAAGCTGGCAGTCAACATGGTGCCCTTCCCMCGTCTCCACTTTTTCATGCCTGGCTTTGCCCCTCTAACCAGCCGTGGAAGCCAGCAGTATCGGGCCCTCACTGTGCCGGAGCTCACCCAGCAGGTCTTCGATGCCAAGAACATGATGGCTGCCTGTGACCCCCGCCATGGCCGGTACCTCACCGTGGCTGCTGTCTTCCGTGGGCGGATGTCCATGAAGGAGGTGGATGAGCAGATGCTCAACGTGCAGAACAAGAACAGCAGYTACTTCGTGGAATGGATCCCCAACAATGTCAAGACRGCTGTCTGCGACATCCCACCCCGTGGCCTCAAGATGGCGGTCACCTTCATTGGAAACAGCACAGCCATCCAGGAGCYGTTCAAGCGCATCTCAGAGCAGTTCACTGCCATGTTCCGCCGGAAGGCCTTTCTCCACTGGTACACAGGTGAGGGCATGGACGAGATGGAGTTCACCGAGGCTGAGAGCAACATGAATGACCTCGTCTCCGAGTACCAGCAGTACCAGGATGCCACCGCAGAAGAGGAGGAGGATTTCGGTGAGGAGGCCGAAGAGGAGGCCTAA

Related Sequences

bmy_16300T0 Protein

Length: 445 aa      
>bmy_16300T0
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNSTAIQEXFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEEDFGEEAEEEA*