Sequence detailsbmy_16301 (Coding sequence)

Part of scaffold_1294 (SequenceType object (1))

For more information consult the page for scaffold_1294 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

FLOT1ENSTTRG00000008335 (Bottlenosed dolphin)

Gene Details

flotillin 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000007896, Bottlenosed dolphin)

Protein Percentage 98.83%
cDNA percentage 98.28%
Ka/Ks Ratio 0.09456 (Ka = 0.0053, Ks = 0.056)

FLOT1ENSBTAG00000009960 (Cow)

Gene Details

Flotillin-1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000013135, Cow)

Protein Percentage 99.3%
cDNA percentage 95.39%
Ka/Ks Ratio 0.0139 (Ka = 0.0031, Ks = 0.2256)

FLOT1 (Minke Whale)

Gene Details

flotillin 1

External Links

Gene match (Identifier: BACU015914, Minke Whale)

Protein Percentage 97.42%
cDNA percentage 97.58%
Ka/Ks Ratio 0.4398 (Ka = 0.0192, Ks = 0.0436)

Additional orthologs identified in other species via the OPTIC pipeline.

Flot1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1284 bp    Location:253478..241932   Strand:-
Raw sequence 
>bmy_16301
ATGTTTTTCACCTGTGGCCCAAACGAGGCCATGGTGGTCTCCGGTTTCTGCCGGAGCCCCCCAGTCATGGTGGCTGGAGGACGTGTCTTTGTCCTGCCCTGCATCCAGCAAATCCAAAGGATCTCTCTCAACACACTGACCCTCAATGTCAAGAGTGAAAAGGTTTACACTCGCCATGGGGTCCCCATCTCAGTCACTGGCATTGCCCAGGTGAAAATTCAGGGCCAGAACAAGGAAATGTTGGCAGCTGCCTGCCAGATGTTCCTGGGCAAGACGGAGGCTGAGATTGCCCACATCGCACTGGAGACGCTGGAGGGCCACCAGAGGGCTATCATGGCCCACATGACTGTGGAGGAAATCTATAAGGACAGGCAGAAATTCTCAGAGCAGGTTTTCAAAGTGGCCTCCTCGGACCTGGTCAACATGGGCATCAGCGTGGTCAGCTACACCCTGAAGGACATTCACGACGATCAGGACTATTTGCACTCCTTGGGGAAGGCTCGAACAGCTCAAGTCCAAAAAGATGCTCGGATTGGGGAAGCGGAGGCCAAGAGAGACGCTGGGATCCGGGAGGCCAAAGCCAAGCAGGAAAAGGTGTCTGCTCAGTACCTGAGTGAGATCGAGATGGCCAAGGCGCAGAGGGACTACGAGCTCAAGAAGGCTGCATATGACATTGAGGTCAACACCCGCCGAGCACAGGCTGACCTGGCCTATCAGCTTCAGGTGGCCAAGACGAAGCAGCAGATCGAGGAGCAGCGGGTCCAGGTGCAGGTGGTGGAGCGGGCCCAGCAGGTGGCAGTGCAGGAGCAGGAGATTGCCCGCCGGGAGAAGGAGCTGGAGGCCCGCGTGCGGAAGCCGGCGGAAGCCGAGCGCTACAAGCTGGAGCGCCTAGCAGCGGCAGAGAAGTCCCAGCTGATCATGCAGGCAGAGGCAGAAGCCGAGTCTGTGCGGATGCGTGGGGAAGCCGAGGCCTTTGCCGTAGGGGCCCGAGCCCGGGCCGAGGCTGAGCAGATGGCCAAGAAGGCAGAGGCATTCCAGCTGTACCAGGAGGCTGCTCAGTTGGACATGCTGCTGGAGAAGCTGCCCCAGGTGGCAGAGGAGATCAGTGGTCCCTTGACCTCGGCCAATAAGATCACACTGGTGTCCAGTGGAAGTGGGGCCATGGGGGCGGCCAAAGTGACYGGGGAAGTGCTGGACATCCTGAGCCGCCTGCCGGAGAGCGTGGAGAGACTCACAGGCGTCAGCATCTCCCAGGTGAACCACAAGCCTCTGAGAACAGCCTGA

Related Sequences

bmy_16301T0 SequenceType object (3)

Length: 428 aa      View alignments
>bmy_16301T0
MFFTCGPNEAMVVSGFCRSPPVMVAGGRVFVLPCIQQIQRISLNTLTLNVKSEKVYTRHGVPISVTGIAQVKIQGQNKEMLAAACQMFLGKTEAEIAHIALETLEGHQRAIMAHMTVEEIYKDRQKFSEQVFKVASSDLVNMGISVVSYTLKDIHDDQDYLHSLGKARTAQVQKDARIGEAEAKRDAGIREAKAKQEKVSAQYLSEIEMAKAQRDYELKKAAYDIEVNTRRAQADLAYQLQVAKTKQQIEEQRVQVQVVERAQQVAVQEQEIARREKELEARVRKPAEAERYKLERLAAAEKSQLIMQAEAEAESVRMRGEAEAFAVGARARAEAEQMAKKAEAFQLYQEAAQLDMLLEKLPQVAEEISGPLTSANKITLVSSGSGAMGAAKVTGEVLDILSRLPESVERLTGVSISQVNHKPLRTA*