Part of scaffold_1300 (Scaffold)

For more information consult the page for scaffold_1300 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LRFN1 ENSTTRG00000003551 (Bottlenosed dolphin)

Gene Details

leucine rich repeat and fibronectin type III domain containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003327, Bottlenosed dolphin)

Protein Percentage 99.31%
cDNA percentage 98.57%
Ka/Ks Ratio 0.04896 (Ka = 0.0029, Ks = 0.0602)

LRFN1 ENSBTAG00000047158 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000055075, Cow)

Protein Percentage 97.92%
cDNA percentage 94.02%
Ka/Ks Ratio 0.03136 (Ka = 0.0096, Ks = 0.3074)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2319 bp    Location:405233..399086   Strand:-
>bmy_16344
ATGGCTCCAGGCCCATTCTCCTCGGCGCTCCTCTCGCTGCCGCCTGCTGCCCTGCCCTTTCTGCTGCTCCTCTGGGCGGGGGCATCTCGAGGCCAGCCCTGCCCCGGCCGCTGCATCTGCCAGAACGTGGCGCCCACGCTGACCATGCTGTGCGCCAAGACCGGCTTGCTCTTTGTGCCGCCGGCCATCGACCGGCGCGTGGTGGAGCTGCGGCTCACCGACAACTTCATCGCGGCCGTCCGCCGCCGAGACTTCGCCAACATGACCAGCCTGGTGCACCTCACCCTCTCCCGGAACACCATCGGCCAGGTGGCGGCCGGCGCCTTTGCAGACCTCCGCGCCCTCCGCGCCCTGCACCTCGACAGCAACCGCTTGGCGGAGGTCCGGGGCGACCAGCTCCGCGGCTTGGGCAACCTCCGCCACCTGATCCTCGGCAACAACCAGATCCGCCGGGTGGAGTCGGCCGCCTTCGACGCCTTTCTCTCCACCGTGGAGGACCTGGATCTGTCCTACAACAACTTGGAGGCCCTGCCGTGGGAGGCCGTAGGCCAGATGGTGAACCTGAACACCCTCACGCTGGACCACAACCTGATCGACCACATCGCCGAAGGTACCTTCGTGCAGCTTCACAAACTGGTTCGCCTGGACATGACCTCCAACCGCCTGCATAAACTGCCCCCTGATGGGCTCTTCCTGAGGTCCCAAGGCCCCGGGCCAAAGCCACCCACGCCGCTCACGGTCAGCTTCGGCGGCAACCCCCTGCACTGCAACTGCGAGCTGCTCTGGCTGCGGCGGCTGACGAGGGAGGATGACCTGGAGACGTGCGCCACCCCTGAGCACCTCACCGACCGCTACTTCTGGTCCATCCCCGAGGAGGAGTTCCTGTGCGAACCTCCGTTGATCACTCGGCAGGCAGGCGGCCGGGCCCTGGTGGTGGAGGGCCAGGCGGTCAGCCTGCGGTGCCGCGCTGTGGGTGACCCTGAGCCGGTGGTGCATTGGGTGGCACCTGACGGGCGGTTGCTGGGGAACTCGAGCCGGACCCGGGTCCGGGGGGATGGGACACTGGATGTAACCATCACCACCTTGCGGGACAGTGGCACGTTCACTTGCATCGCCTCCAACGCCGCCGGGGAAGCCACGGCACCGGTGGAGGTGTGCGTGGTGCCTCTGCCTCTGATGGCGCCCCCACCGGCCGCCCCGCCACCTCTCACCGAGCCTGGCTCCTCAGACATCGCCACGCCTGGCCGACCTGGTGCCAATGAATCTGGGGCTGAGCGCCGGCTTGTGGCTGCCGAGCTCACCTCCAGCTCCGTGCTCATCCGCTGGCCAGCCCAGAGGCCCGTGCCTGGCATTCGCATGTACCAGGTCCAGTACAACAGCTCCGCAGATGACTCCCTTGTCTACAGGATGATCCCATCCACCAGCCAGACCTTCCTGGTGAATGATCTGGCAGCGGGCCGCGCCTACGACCTGTGCGTGCTGGCCGTCTACGACGATGGGGCCACGGCGCTGCCCGCCACCCGAGTGGTGGGCTGCGTGCAGTTTACCACGGCAGGGGATCCCGCGCCCTGCCGCCCACTGAGGGCCCATTTCTTGGGCGGCACTATGATCATCGCCATCGGGGGTGTTATTGTCGCCTCCGTCCTCGTTTTCATAGTTCTGCTCATGATCCGCTACAAGGTCTACGGCGATGGGGATGGCCGCCGAGTCAAGGGCACCTCCAGGTCGCCTCCGCGGGTCAGCCACGTGTGCTCTCAGACCAACGGCGCAGGCGCAGGCGCAACGCAAGCCCCGCCCCCGCCGGCGCAAGACCGCTACGAGGCGCTGCGCGAGGTGCCAGCTTCGGCTGCTGCGGCGGTGGCTGTCGAGGCAAAGGCCGTGGCGGCCGACACGGCTTCCGCGGAACCGGAGGCGGTCCTTGGACGCTCCCTGGGTGGCTCAGCCACCTCGCTGTGCCTGCTGCCGTCCGAGGAAACCTCCGGGGAGGAGTCCCGGGCCGCTGCGGGCCCTCGGAGGAGCCGTTCTGGGGCCCTGGGACCGCTGGCTTCGGCGCCCCCCGCTTTAGCTCTGGTTCCTGGGGGAGCCCCGGCCCGGCCGAGGCCGCAGCAGCGCTATTCGTTTGACGGGGACTACGGGGCGCTCTTCCAGAGCCACAGTTACCCGCGCCGCGCCCGGCGGACAAAGCGCCACCGGTCCACGCCGCACCTGGACGGGGCCGGAGGGGGCGCGGCCGGGGACGACGGAGACCTGGGGCTGGGCTCCGCCAGGGCGCGCCTGGCCTTTACCAGCACCGAGTGGATGCTGGAGAGTACCGTGTGA

Related Sequences

bmy_16344T0 Protein

Length: 773 aa      View alignments
>bmy_16344T0
MAPGPFSSALLSLPPAALPFLLLLWAGASRGQPCPGRCICQNVAPTLTMLCAKTGLLFVPPAIDRRVVELRLTDNFIAAVRRRDFANMTSLVHLTLSRNTIGQVAAGAFADLRALRALHLDSNRLAEVRGDQLRGLGNLRHLILGNNQIRRVESAAFDAFLSTVEDLDLSYNNLEALPWEAVGQMVNLNTLTLDHNLIDHIAEGTFVQLHKLVRLDMTSNRLHKLPPDGLFLRSQGPGPKPPTPLTVSFGGNPLHCNCELLWLRRLTREDDLETCATPEHLTDRYFWSIPEEEFLCEPPLITRQAGGRALVVEGQAVSLRCRAVGDPEPVVHWVAPDGRLLGNSSRTRVRGDGTLDVTITTLRDSGTFTCIASNAAGEATAPVEVCVVPLPLMAPPPAAPPPLTEPGSSDIATPGRPGANESGAERRLVAAELTSSSVLIRWPAQRPVPGIRMYQVQYNSSADDSLVYRMIPSTSQTFLVNDLAAGRAYDLCVLAVYDDGATALPATRVVGCVQFTTAGDPAPCRPLRAHFLGGTMIIAIGGVIVASVLVFIVLLMIRYKVYGDGDGRRVKGTSRSPPRVSHVCSQTNGAGAGATQAPPPPAQDRYEALREVPASAAAAVAVEAKAVAADTASAEPEAVLGRSLGGSATSLCLLPSEETSGEESRAAAGPRRSRSGALGPLASAPPALALVPGGAPARPRPQQRYSFDGDYGALFQSHSYPRRARRTKRHRSTPHLDGAGGGAAGDDGDLGLGSARARLAFTSTEWMLESTV*