Sequence detailsbmy_16344 (Coding sequence)

Part of scaffold_1300 (SequenceType object (1))

For more information consult the page for scaffold_1300 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LRFN1ENSTTRG00000003551 (Bottlenosed dolphin)

Gene Details

leucine rich repeat and fibronectin type III domain containing 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000003327, Bottlenosed dolphin)

Protein Percentage 99.31%
cDNA percentage 98.57%
Ka/Ks Ratio 0.04896 (Ka = 0.0029, Ks = 0.0602)

LRFN1ENSBTAG00000047158 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000055075, Cow)

Protein Percentage 97.92%
cDNA percentage 94.02%
Ka/Ks Ratio 0.03136 (Ka = 0.0096, Ks = 0.3074)

Additional orthologs identified in other species via the OPTIC pipeline.

LRFN1 (Human)   Lrfn1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2319 bp    Location:405233..399086   Strand:-
Raw sequence 
>bmy_16344
ATGGCTCCAGGCCCATTCTCCTCGGCGCTCCTCTCGCTGCCGCCTGCTGCCCTGCCCTTTCTGCTGCTCCTCTGGGCGGGGGCATCTCGAGGCCAGCCCTGCCCCGGCCGCTGCATCTGCCAGAACGTGGCGCCCACGCTGACCATGCTGTGCGCCAAGACCGGCTTGCTCTTTGTGCCGCCGGCCATCGACCGGCGCGTGGTGGAGCTGCGGCTCACCGACAACTTCATCGCGGCCGTCCGCCGCCGAGACTTCGCCAACATGACCAGCCTGGTGCACCTCACCCTCTCCCGGAACACCATCGGCCAGGTGGCGGCCGGCGCCTTTGCAGACCTCCGCGCCCTCCGCGCCCTGCACCTCGACAGCAACCGCTTGGCGGAGGTCCGGGGCGACCAGCTCCGCGGCTTGGGCAACCTCCGCCACCTGATCCTCGGCAACAACCAGATCCGCCGGGTGGAGTCGGCCGCCTTCGACGCCTTTCTCTCCACCGTGGAGGACCTGGATCTGTCCTACAACAACTTGGAGGCCCTGCCGTGGGAGGCCGTAGGCCAGATGGTGAACCTGAACACCCTCACGCTGGACCACAACCTGATCGACCACATCGCCGAAGGTACCTTCGTGCAGCTTCACAAACTGGTTCGCCTGGACATGACCTCCAACCGCCTGCATAAACTGCCCCCTGATGGGCTCTTCCTGAGGTCCCAAGGCCCCGGGCCAAAGCCACCCACGCCGCTCACGGTCAGCTTCGGCGGCAACCCCCTGCACTGCAACTGCGAGCTGCTCTGGCTGCGGCGGCTGACGAGGGAGGATGACCTGGAGACGTGCGCCACCCCTGAGCACCTCACCGACCGCTACTTCTGGTCCATCCCCGAGGAGGAGTTCCTGTGCGAACCTCCGTTGATCACTCGGCAGGCAGGCGGCCGGGCCCTGGTGGTGGAGGGCCAGGCGGTCAGCCTGCGGTGCCGCGCTGTGGGTGACCCTGAGCCGGTGGTGCATTGGGTGGCACCTGACGGGCGGTTGCTGGGGAACTCGAGCCGGACCCGGGTCCGGGGGGATGGGACACTGGATGTAACCATCACCACCTTGCGGGACAGTGGCACGTTCACTTGCATCGCCTCCAACGCCGCCGGGGAAGCCACGGCACCGGTGGAGGTGTGCGTGGTGCCTCTGCCTCTGATGGCGCCCCCACCGGCCGCCCCGCCACCTCTCACCGAGCCTGGCTCCTCAGACATCGCCACGCCTGGCCGACCTGGTGCCAATGAATCTGGGGCTGAGCGCCGGCTTGTGGCTGCCGAGCTCACCTCCAGCTCCGTGCTCATCCGCTGGCCAGCCCAGAGGCCCGTGCCTGGCATTCGCATGTACCAGGTCCAGTACAACAGCTCCGCAGATGACTCCCTTGTCTACAGGATGATCCCATCCACCAGCCAGACCTTCCTGGTGAATGATCTGGCAGCGGGCCGCGCCTACGACCTGTGCGTGCTGGCCGTCTACGACGATGGGGCCACGGCGCTGCCCGCCACCCGAGTGGTGGGCTGCGTGCAGTTTACCACGGCAGGGGATCCCGCGCCCTGCCGCCCACTGAGGGCCCATTTCTTGGGCGGCACTATGATCATCGCCATCGGGGGTGTTATTGTCGCCTCCGTCCTCGTTTTCATAGTTCTGCTCATGATCCGCTACAAGGTCTACGGCGATGGGGATGGCCGCCGAGTCAAGGGCACCTCCAGGTCGCCTCCGCGGGTCAGCCACGTGTGCTCTCAGACCAACGGCGCAGGCGCAGGCGCAACGCAAGCCCCGCCCCCGCCGGCGCAAGACCGCTACGAGGCGCTGCGCGAGGTGCCAGCTTCGGCTGCTGCGGCGGTGGCTGTCGAGGCAAAGGCCGTGGCGGCCGACACGGCTTCCGCGGAACCGGAGGCGGTCCTTGGACGCTCCCTGGGTGGCTCAGCCACCTCGCTGTGCCTGCTGCCGTCCGAGGAAACCTCCGGGGAGGAGTCCCGGGCCGCTGCGGGCCCTCGGAGGAGCCGTTCTGGGGCCCTGGGACCGCTGGCTTCGGCGCCCCCCGCTTTAGCTCTGGTTCCTGGGGGAGCCCCGGCCCGGCCGAGGCCGCAGCAGCGCTATTCGTTTGACGGGGACTACGGGGCGCTCTTCCAGAGCCACAGTTACCCGCGCCGCGCCCGGCGGACAAAGCGCCACCGGTCCACGCCGCACCTGGACGGGGCCGGAGGGGGCGCGGCCGGGGACGACGGAGACCTGGGGCTGGGCTCCGCCAGGGCGCGCCTGGCCTTTACCAGCACCGAGTGGATGCTGGAGAGTACCGTGTGA

Related Sequences

bmy_16344T0 SequenceType object (3)

Length: 773 aa      View alignments
>bmy_16344T0
MAPGPFSSALLSLPPAALPFLLLLWAGASRGQPCPGRCICQNVAPTLTMLCAKTGLLFVPPAIDRRVVELRLTDNFIAAVRRRDFANMTSLVHLTLSRNTIGQVAAGAFADLRALRALHLDSNRLAEVRGDQLRGLGNLRHLILGNNQIRRVESAAFDAFLSTVEDLDLSYNNLEALPWEAVGQMVNLNTLTLDHNLIDHIAEGTFVQLHKLVRLDMTSNRLHKLPPDGLFLRSQGPGPKPPTPLTVSFGGNPLHCNCELLWLRRLTREDDLETCATPEHLTDRYFWSIPEEEFLCEPPLITRQAGGRALVVEGQAVSLRCRAVGDPEPVVHWVAPDGRLLGNSSRTRVRGDGTLDVTITTLRDSGTFTCIASNAAGEATAPVEVCVVPLPLMAPPPAAPPPLTEPGSSDIATPGRPGANESGAERRLVAAELTSSSVLIRWPAQRPVPGIRMYQVQYNSSADDSLVYRMIPSTSQTFLVNDLAAGRAYDLCVLAVYDDGATALPATRVVGCVQFTTAGDPAPCRPLRAHFLGGTMIIAIGGVIVASVLVFIVLLMIRYKVYGDGDGRRVKGTSRSPPRVSHVCSQTNGAGAGATQAPPPPAQDRYEALREVPASAAAAVAVEAKAVAADTASAEPEAVLGRSLGGSATSLCLLPSEETSGEESRAAAGPRRSRSGALGPLASAPPALALVPGGAPARPRPQQRYSFDGDYGALFQSHSYPRRARRTKRHRSTPHLDGAGGGAAGDDGDLGLGSARARLAFTSTEWMLESTV*