Part of scaffold_1300 (Scaffold)

For more information consult the page for scaffold_1300 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MED29 ENSTTRG00000003561 (Bottlenosed dolphin)

Gene Details

mediator complex subunit 29

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003338, Bottlenosed dolphin)

Protein Percentage 96.43%
cDNA percentage 95.95%
Ka/Ks Ratio 0.20956 (Ka = 0.0231, Ks = 0.1103)

MED29 ENSBTAG00000020429 (Cow)

Gene Details

Mediator of RNA polymerase II transcription subunit 29

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027226, Cow)

Protein Percentage 97.5%
cDNA percentage 93.67%
Ka/Ks Ratio 0.06181 (Ka = 0.013, Ks = 0.21)

MED29  (Minke Whale)

Gene Details

mediator complex subunit 29

External Links

Gene match (Identifier: BACU018774, Minke Whale)

Protein Percentage 98.55%
cDNA percentage 99.03%
Ka/Ks Ratio 0.57748 (Ka = 0.0081, Ks = 0.014)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 699 bp    Location:470054..473459   Strand:+
>bmy_16348
GGAGCTAACCAGCAAACGGGGCCTAGAGACGAAGAAGCTAAAAAGAAACCGGGAAGACGCGCTTCTGACGCACTTCCCGCGCGCGAAGCGAGGAAGATGGCTGCATCCCAGCAGCAGGCTTCCGCGGCTTCCTCTGCCGCTAGTGTGTCAGGTCCGGGTTCGGCCGGTGGCTCTGGTCCCCAGCAGCAGCCACAACCACCAACACAGCTTGTGGGACCTGCCCAGAGCGGGCTTTTGCAGCAACAGCAACAGGACTTCGATCCTGTGCAGCGCTATAAGATGCTCATCCCGCAGCTGAAGGAAAGTCTGCAGACCTTGATGAAGGTTGCAGCCCAGAACTTGATTCAGAACACTAACATTGACAATGGACAGAAGAGCAGCGATGGACCCATTCAGCGCTTTGACAAGTGTCTGGAGGAGTTCTACGCACTCTGTGACCAGCTAGAGCTCTGCCTGCGCCTGGCCCATGAGTGCCTGTCACAGAGTTGCGACAGTGCCAAGCACTCTCCGACACTGGTGCCCACAGCCACCAAGCCTGATGCCGTCCAGCCTGACAGCCTGCCCTACCCGCAATACCTGGCGGTCATCAAAGCCCAGATTGCCTGTGCCAAGGACATTCACACTGCCCTGCTGGACTGCGCCAACAAGGTCACAGGCAAGACGCCTGCACCGCCTACGGGCCCTGGGGGCGCCCTGTGA

Related Sequences

bmy_16348T0 Protein

Length: 233 aa      View alignments
>bmy_16348T0
GANQQTGPRDEEAKKKPGRRASDALPAREARKMAASQQQASAASSAASVSGPGSAGGSGPQQQPQPPTQLVGPAQSGLLQQQQQDFDPVQRYKMLIPQLKESLQTLMKVAAQNLIQNTNIDNGQKSSDGPIQRFDKCLEEFYALCDQLELCLRLAHECLSQSCDSAKHSPTLVPTATKPDAVQPDSLPYPQYLAVIKAQIACAKDIHTALLDCANKVTGKTPAPPTGPGGAL*