Part of scaffold_1303 (Scaffold)

For more information consult the page for scaffold_1303 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CASR ENSTTRG00000001409 (Bottlenosed dolphin)

Gene Details

Calcium-sensing receptor

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001326, Bottlenosed dolphin)

Protein Percentage 99.34%
cDNA percentage 99.01%
Ka/Ks Ratio 0.0716 (Ka = 0.0028, Ks = 0.0394)

CASR ENSBTAG00000003865 (Cow)

Gene Details

extracellular calcium-sensing receptor precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000005042, Cow)

Protein Percentage 97.04%
cDNA percentage 93.98%
Ka/Ks Ratio 0.03738 (Ka = 0.0131, Ks = 0.3494)

CASR  (Minke Whale)

Gene Details

calcium-sensing receptor

External Links

Gene match (Identifier: BACU006064, Minke Whale)

Protein Percentage 99.51%
cDNA percentage 99.07%
Ka/Ks Ratio 0.04628 (Ka = 0.002, Ks = 0.0442)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1830 bp    Location:558152..566909   Strand:+
>bmy_16369
ATGGGGGAGCAGGTAACTTTCGATGAATGTGGAGACCTGGCAGGGAACTATTCCATCATCAATTGGCACCTCTCCCCAGAGGATGGCTCCATAGTGTTTAAGGAAGTTGGATATTACAATGTCTATGCCAAGAAAGGAGAAAGGCTCTTCATCAATGAGGAGAAAATCCTATGGAGTGGATTCTCAAGGGAGGTGCCTTTCTCCAACTGCAGCCGAGACTGCCTGGCAGGGACCAGGAAAGGAATCATTGAGGGGGAACCCACCTGCTGCTTTGAGTGCGTGGAGTGTCCCGATGGGGAGTATAGTGATGAGACAGACGCGAGTGCCTGTGACAAGTGCCCTGATGACTTCTGGTCCAATGAGAACCACACTTCCTGCATTGCCAAGGAGATTGAGTTTCTGTCTTGGACTGAGCCCTTTGGGATCGCACTCACCCTCTTTGCTGTGCTGGGCATTTTCCTCACTGCCTTCGTGCTGGGCGTCTTCATCAAGTTCCGCAACACGCCCATTGTCAAGGCCACCAACCGAGAGCTCTCCTACCTCCTCCTCTTCTCCCTGCTCTGCTGTTTCTCCAGCTCCCTGTTCTTCATTGGGGAGCCCCAGGACTGGACCTGTCGCCTGCGCCAGCCGGCCTTTGGTATCAGCTTCGTGCTCTGCATCTCGTGCATCCTGGTGAAAACCAACCGCGTCCTCCTGGTGTTTGAGGCCAAGATTCCCACCAGCTTCCACCGCAAGTGGTGGGGGCTCAACCTGCAGTTCCTGCTGGTCTTCCTCTGCACCTTCATGCAGATCGTCATCTGTGCCATCTGGCTCAACACCGCGCCCCCCTCGAGCTACCGCAACCACGAGCTGGAGGATGAGATCATCTTCATCACCTGCCACGAGGGCTCGCTCATGGCACTGGGCTTCCTGATCGGCTACACCTGCCTGCTGGCTGCCATCTGCTTCTTCTTCGCCTTCAAGTCCCGGAAGCTGCCGGAGAACTTCAACGAAGCCAAGTTCATCACCTTCAGCATGCTCATCTTCTTCATCGTCTGGATCTCGTTCATTCCCGCCTACGCCAGCACCTACGGCAAGTTTGTCTCTGCCGTGGAGGTGATCGCTATCCTGGCGGCCAGCTTTGGCTTGCTGGCCTGCATCTTCTTCAACAAGGTCTACATCATCCTCTTCAAGCCGTCCCGTAACACCATCGAGGAGGTGCGCTGCAGCACCGCGGCTCACGCCTTCAAGGTGGCGGCCCGCGCCACGCTGCGCCGCAGCAATGTCTCCCGCCAGCGGTCCAGCAGCCTTGGGGGCTCCACGGGATCCACCCCCTCCTCCTCCATCAGCAGCAAGAGCAACAGCGAGGACCCCTTCCCGCAGCCTGAGAGGCAGAAGCAGCAGCAGCCGCTGGCCCTGACCCAGTGCGCGCAGCAGCCGCAGCCGCGGCCGCCCTCGACCCTGCAGCCGCAGCAGCAATCGCAGCAGCAACCCAGATGCAAGCAGAAGGTCATTTTCGGCAGTGGCACAGTCACCTTCTCGCTGAGCTTTGACGAGCCTCAGAAGAGCGCCATGGCTCACAGGAATTCCACGCACCAGAACTCCCTGGAGGCCCAGAAGAACAACGACGCCCTGACCAGGCACCAGGCGTTACTCCCGCTGCAGTGCGGGGAGACAGACTCGGAACTGACCGCCCAGGAGACAGACCTGCAGGGGCCTGTGGGTGGGGACCACCAGCCAGAGATGGAGGACCCAGAAGAGATGTCCCCAGCACTTGTAGTGTCTAATTCACGGAGCTTTGTCATCAGCGGTGGAGGCAGCACTGTCACAGAAAACATGCTGCGTTCCTAA

Related Sequences

bmy_16369T0 Protein

Length: 610 aa      View alignments
>bmy_16369T0
MGEQVTFDECGDLAGNYSIINWHLSPEDGSIVFKEVGYYNVYAKKGERLFINEEKILWSGFSREVPFSNCSRDCLAGTRKGIIEGEPTCCFECVECPDGEYSDETDASACDKCPDDFWSNENHTSCIAKEIEFLSWTEPFGIALTLFAVLGIFLTAFVLGVFIKFRNTPIVKATNRELSYLLLFSLLCCFSSSLFFIGEPQDWTCRLRQPAFGISFVLCISCILVKTNRVLLVFEAKIPTSFHRKWWGLNLQFLLVFLCTFMQIVICAIWLNTAPPSSYRNHELEDEIIFITCHEGSLMALGFLIGYTCLLAAICFFFAFKSRKLPENFNEAKFITFSMLIFFIVWISFIPAYASTYGKFVSAVEVIAILAASFGLLACIFFNKVYIILFKPSRNTIEEVRCSTAAHAFKVAARATLRRSNVSRQRSSSLGGSTGSTPSSSISSKSNSEDPFPQPERQKQQQPLALTQCAQQPQPRPPSTLQPQQQSQQQPRCKQKVIFGSGTVTFSLSFDEPQKSAMAHRNSTHQNSLEAQKNNDALTRHQALLPLQCGETDSELTAQETDLQGPVGGDHQPEMEDPEEMSPALVVSNSRSFVISGGGSTVTENMLRS*