Part of scaffold_1314 (Scaffold)

For more information consult the page for scaffold_1314 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRH ENSTTRG00000009888 (Bottlenosed dolphin)

Gene Details

thyrotropin-releasing hormone

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009375, Bottlenosed dolphin)

Protein Percentage 94.25%
cDNA percentage 96.46%
Ka/Ks Ratio 0.40579 (Ka = 0.0269, Ks = 0.0664)

TRH ENSBTAG00000005306 (Cow)

Gene Details

prothyroliberin precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000006982, Cow)

Protein Percentage 80.97%
cDNA percentage 86.58%
Ka/Ks Ratio 0.30814 (Ka = 0.102, Ks = 0.3311)

TRH  (Minke Whale)

Gene Details

thyrotropin-releasing hormone

External Links

Gene match (Identifier: BACU015196, Minke Whale)

Protein Percentage 97.57%
cDNA percentage 98.71%
Ka/Ks Ratio 0.63581 (Ka = 0.0113, Ks = 0.0178)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 885 bp    Location:12215..15497   Strand:+
>bmy_16384
CGACCCCTCCCCGCTGACCTCACCCGCGCCGCCGCCTCGCGCAGATATAAGCAGCAGCCCCGCCGAGAAGCTGGCAGCCGGCGTCCCGGGTCCTGCGAGCGTTCCCCGACTCCTGACCCGCCCACTCCAGACCCCAAAACTCCGGATCGGAGCCCAGGATCCCGGACCAGTCCGCGGAGCTCGCGCCGGGCAGGCGCCACGATGTCCGGCCCTTGGTTTCTGCTTGCCATGGTTTTGACCCTGACCCTGACCGGTGTCCGCGCACAGCCGGAGGTGGCCCAGCAGGAGGCGGCTATAGCCGCCGAGCAACTGGGCCTGGACGACCTGCTGCGGCAGGCGGAGCCCCTCCTCCTCCTCCGGGAAGACCTCCAGCGACTCCGAGAGGACCAGGAAGATAGCGAATCAGAGTCCCAGATCTTTCAACCCCATTGGCTCTCCAAGCGTCAGCATCCAGGCAAAAGGGAGGAGGAGTTCGAAGAGGGAGTTGAAGAGGAAGAGGAAGAAGGAGGGGCCGTGGGACCCCACAAACGGCAGCACACTGGCCGGCAGGAGGATGTGGCTGCATGGTCAGAGGATGTAAGCCAGCAGAAGCGGCAGCACCCTGGCCGGCGCTCCTCCTGGCTTGGGTACACTTCCACCAAGAGGCAGCACCCAGGCAGACGGCTGGTGGATCCCCAGGCCCAAAGCAGCTGGGAAGAGGAGGAGGAGGAGGGAGAGCTGATGCCTGAGAAACGCCAACATCCGGGAAAGAGGGCCCTGGGAAGCCCATGTGGGCCCTGGGGATCCTGTGGTCAAGCCAGCCTTCTGCTGGGCCTCCTGGATGACCTGAGCAGGGGCCAGGGGGCTGAAGAGAAGCGGCAGCACCCTGGGCGGCGATCGGCCTAG

Related Sequences

bmy_16384T0 Protein

Length: 295 aa      View alignments
>bmy_16384T0
RPLPADLTRAAASRRYKQQPRREAGSRRPGSCERSPTPDPPTPDPKTPDRSPGSRTSPRSSRRAGATMSGPWFLLAMVLTLTLTGVRAQPEVAQQEAAIAAEQLGLDDLLRQAEPLLLLREDLQRLREDQEDSESESQIFQPHWLSKRQHPGKREEEFEEGVEEEEEEGGAVGPHKRQHTGRQEDVAAWSEDVSQQKRQHPGRRSSWLGYTSTKRQHPGRRLVDPQAQSSWEEEEEEGELMPEKRQHPGKRALGSPCGPWGSCGQASLLLGLLDDLSRGQGAEEKRQHPGRRSA*