Part of scaffold_1325 (Scaffold)

For more information consult the page for scaffold_1325 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

KIAA0020 ENSTTRG00000001062 (Bottlenosed dolphin)

Gene Details

KIAA0020

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000999, Bottlenosed dolphin)

Protein Percentage 87.55%
cDNA percentage 87.48%
Ka/Ks Ratio 0.28384 (Ka = 0.0097, Ks = 0.0341)

KIAA0020 ENSBTAG00000013357 (Cow)

Gene Details

pumilio domain-containing protein KIAA0020

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000017765, Cow)

Protein Percentage 95.71%
cDNA percentage 92.72%
Ka/Ks Ratio 0.08618 (Ka = 0.0211, Ks = 0.2445)

KIAA0020  (Minke Whale)

Gene Details

KIAA0020 ortholog

External Links

Gene match (Identifier: BACU009465, Minke Whale)

Protein Percentage 98.78%
cDNA percentage 98.64%
Ka/Ks Ratio 0.15828 (Ka = 0.0057, Ks = 0.0361)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1473 bp    Location:339058..303972   Strand:-
>bmy_16397
ATGTGTGATTTGCAGAAGTTGATTCAAGGGAAAATTAAAACTATTGCGTTTGCACATGATTCAACTCGTGTGATCCAGTGTTACATTCAGTATGGCAACGAAGAGCAGAGGAAACAGGCTTTTGAAGAACTGCGAGGTGATTTGGTTGAATTAAGTAAAGCTAAATATTCCAGAAATATTGTTAAGAAGTTTCTCATGTATGGGAATAAAGCACAGATTGCAGAGATAATGAGAAGCTTTAAAGGTCACGTGAGGAAGATGCTGCGGCATGCGGAAGCGTCCGCCATCGTGGAGTACGCCTACAATGATAAAGCCATCTTGGAGCAGAGGAACATGCTGACAGAAGAGCTCTATGGGAACACATTTCAGCTTTACAAGTCAGCAGATCACCCAACTCTGGACAAAGTATTAAAGGTACAGCCAGAAAAACTAGAGCTTATCATGGATGAAATGAAACAGATTCTAACTCCAATGGCCCAAAAAGAAGCTGTGATTAAGCACTCACTGGTACATAAAGTATTCTTGGACTTTTTTACCTATGCACCCCCAAAGCTGAGATCAGAAATGATTGAAGCCATCCGAGAAGCAGTGGTATATCTGGCGCACACACACGATGGCGCCAGAGTGGCCATGCACTGCCTGTGGCATGGCACGCCCAAGGACAGGAAAGTGATTGTGAAAACAATGAAGACTTATGTTGAAAAGGTGGCTAATGGCCAATACTCCCACTTGGTTTTATTGGCGGCATTTGACTGTATTGATGATACTAAGCTTGTGAGGCAGATAATCATATCAGAAATTATTAATTCCTTGCCTAACATAGTAAATGACAAATATGGAAGGAAAGTCCTGTTGTATTTACTAAGCCCCAGAGATCCTGCACACACGGTAAGAGAGATCATTGAAGTTCTGCAGAAAGGAGATGGTAACGCACACAGTAAGAAAGATACAGAGATCCGCCAACGAGAGCTCTTAGAATCCATTTCTCCAGCTTTGCTAAGCTACCTGCAAGGACACGCTCAAGAGGTGGTGCTGGATAAGTCTGCGTGTGTGCTTGTGGCTGACATCCTGGGAGCTGCCATTGGAGACGTGCAGCCCGCCATGAATGCCGTCGCCAGTTTGGCAGCGGCAGAGCTGCATCCTGGTGGCAAGGATGGAGAGCTTCACGTTGCAGAACATCCTGCAGGACATCTAGTTCTGAAGTGGTTAATAGAGCAAGATAAAAAGATGAAAGAAAGTGGACGAGAAGGTTGTTTTGCAAAAACACTCGTAGAGCTTGTTGGTATGAAGAACCTGAAGTCCTGGGCTAGTGTCAATCGAGGAGCCATTATTCTTTCTAGCCTTCTCCAGAGCTCTGATCAAGATGTTGCAAATAAAGTCAAAGCTGGATTGAAAAGCCTTATTCCCACATTGGAAAAAAACAAAAACACCAGCAAAGGAATAGAAATGCTACTTGAAAAACTGACTGCCTAA

Related Sequences

bmy_16397T0 Protein

Length: 491 aa      View alignments
>bmy_16397T0
MCDLQKLIQGKIKTIAFAHDSTRVIQCYIQYGNEEQRKQAFEELRGDLVELSKAKYSRNIVKKFLMYGNKAQIAEIMRSFKGHVRKMLRHAEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLYKSADHPTLDKVLKVQPEKLELIMDEMKQILTPMAQKEAVIKHSLVHKVFLDFFTYAPPKLRSEMIEAIREAVVYLAHTHDGARVAMHCLWHGTPKDRKVIVKTMKTYVEKVANGQYSHLVLLAAFDCIDDTKLVRQIIISEIINSLPNIVNDKYGRKVLLYLLSPRDPAHTVREIIEVLQKGDGNAHSKKDTEIRQRELLESISPALLSYLQGHAQEVVLDKSACVLVADILGAAIGDVQPAMNAVASLAAAELHPGGKDGELHVAEHPAGHLVLKWLIEQDKKMKESGREGCFAKTLVELVGMKNLKSWASVNRGAIILSSLLQSSDQDVANKVKAGLKSLIPTLEKNKNTSKGIEMLLEKLTA*