Sequence detailsbmy_16408 (Coding sequence)

Part of scaffold_1333 (SequenceType object (1))

For more information consult the page for scaffold_1333 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

FAM171A1ENSTTRG00000004422 (Bottlenosed dolphin)

Gene Details

family with sequence similarity 171, member A1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004165, Bottlenosed dolphin)

Protein Percentage 94.7%
cDNA percentage 95.58%
Ka/Ks Ratio 0.27923 (Ka = 0.0307, Ks = 0.11)

C13H10ORF38ENSBTAG00000008787 (Cow)

Gene Details

protein FAM171A1 precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000032454, Cow)

Protein Percentage 90.74%
cDNA percentage 90.29%
Ka/Ks Ratio 0.15183 (Ka = 0.0501, Ks = 0.3298)

FAM171A1 (Minke Whale)

Gene Details

family with sequence similarity 171, member A1

External Links

Gene match (Identifier: BACU017220, Minke Whale)

Protein Percentage 95.75%
cDNA percentage 96.77%
Ka/Ks Ratio 0.41417 (Ka = 0.0263, Ks = 0.0634)

Additional orthologs identified in other species via the OPTIC pipeline.

FAM171A1 (Human)   Fam171a1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2049 bp    Location:159977..169301   Strand:+
Raw sequence 
>bmy_16408
ATGGACACAGGATATGACTCGAATCTTGAAGGATGGGTAGATTTTTGGAAGAGAGGAAAAGCATGTGAGGTTGGAACAACAGTTGAGGGCAAAGTCATGGACTCGGGAACGTGGCTGAAGAGTGGTCTCGGCCTCGTGCACCAGGAAGGAAGCCAGCTGACGTGGACATATATCGCCCCTCAGTTGGGGTACTGGGTGGCAGCCATGTCTCCTCCCAACCCAGGTCCCGTTGTCACACAGGACATCGCCACGTATCACACGGTGTTTCTTTTGGCCATCTTGGGAGGAATGGCTTTCATTCTTTTGGTTTTGCTGTGTCTCCTTTTATATTATTGCAGGCGGAAGTGCTTGAAACCCCGCCAGCACCATAGAAAACTGCAACTTCCTGCCACCCTGGAGAGTTCCAAAAGGGATCAGTCAACTTCCATGTCACACATCAACCTGCTGTTTTCTCGGCGGGAATCAGAATTCCCTGGCCCGCTCTCCGTCACCAGCCAGGGCCGCCCCCCGGACGCCCCGGGCTCAAAGGAGTTGATGAGCGGAGTCCATTTAGAGATGATGTCTTCCAGCGGGGAGGTGGACATGCACACGCCCATGCTGAAGCTCTCCTACAGCACCTCGCAGGAGTTCAGCTCTCGGGAGGAACTCCTGTCGCACAAGGAGGAGGATAAAAGCCAAATCTCCTTTGACAACCTGACACCGAGTGGGACGTTGGGAAAAGACTACCGTAAGTCGGTGGAGATTTTCCCCTTAAAGGCCAGGAAATCTGTGGAAAGGGAAGGCTATGAGTCCCCCGGCAACAGTGACTACAGGAGGAATTACAATGCCATGCTCTCGCAGCCTTTATTTGAAAAGCAAGACAGAGACGGTCAGGCCTCCGTGACCCACATTTCCACAGGAAGTAAGCTCACCATTCAGGAACACATGTACCCCGCGCCTTCATCTCCGGAGAAAGACCAGCTGATGGAGCGCAGACCTACTGAATGTATGATGTCGCGATCGGTAGACCACCTGGAGAGACCTACCTCTTTCCCGCGGCCCGGCCAGCTGATCTGCTGTAGTTCCGTGGACCAGGTCAATGACAGCGTTTACAGGAAAGTATTACCTGCCTTGGTCATCCCGGCTCATTACATGAAACTCCCAGGGGACCATTCGTATGTGGGCCAGCCCCTGGTCGTCCCAGCCGACCAGCAGCTCGAGATCGAAAGACTGCAGGCCGAGCTCTCCAGCCCTCACGCGGGGATCTTCCCACACGCCTCCTCACAGATCCAGGCCCAGCCCTTATCTTGCCAGGCCATCTCGCAGCAGCACCTGCAGGACGCGGGCACCCGGGAGTGGACCCCGCAGAATGCGTCCATGTCCGAGTCCCTCTCCATCCCGGCATCCCTGAACGACGCGGCCTTGGCTCAGATGAACAGCGAGGTCCAGCTCCTGACCGAAAAGGCGCTGTTGGAACTTGGGGGTGGGAAGCCCCTTCCCCACCCCCGGGCCTGGTTCGTCTCCCTGGACGGCCGGTCCAATGCACACGTCAGACATTCCTACATTGATCTCCAAAGAGCTGGGAGGAACGGAAGCAATGATGCCAGTTTGGATTCTGGCGTGGATATGAATGAACCCAAATCTGCCCGGAAGGGAAGAGGAGACCCCTTGCCTCTGCCGCAGAACCACCCACCGGTCCCGGAGCATGCGCAGAAAGAGCCGCGGGCCGCGGACAGCTCGGCCTACACGCAGCTCGTGTACCTGGACGACACGGACCAGAGCGGCAGCGAGGGCGGCACCGCGGTCGGGACGCCCGAGGACAGCGCCCTGCGGTGCCTGCTGGACGGCTCCAGCCGGAGAAGCGGCGGCCAGCTGCCCAGCCTGCAGGAGGAGACGACGAAACGAACCTCGGACGTCCCCCCGGCGCCATCGGCCAGTCCCGACAAGAGGCGATCGGCTCAGGAGGACGAGGACGACGACGACGACGACGACGACGACCAGGGCGAAGGCAAGAAGAGCCCGTGGCAGAAGCGGGAGGAGCGACCCCTGATGGCGTTCAACATCAAATGA

Related Sequences

bmy_16408T0 SequenceType object (3)

Length: 683 aa      View alignments
>bmy_16408T0
MDTGYDSNLEGWVDFWKRGKACEVGTTVEGKVMDSGTWLKSGLGLVHQEGSQLTWTYIAPQLGYWVAAMSPPNPGPVVTQDIATYHTVFLLAILGGMAFILLVLLCLLLYYCRRKCLKPRQHHRKLQLPATLESSKRDQSTSMSHINLLFSRRESEFPGPLSVTSQGRPPDAPGSKELMSGVHLEMMSSSGEVDMHTPMLKLSYSTSQEFSSREELLSHKEEDKSQISFDNLTPSGTLGKDYRKSVEIFPLKARKSVEREGYESPGNSDYRRNYNAMLSQPLFEKQDRDGQASVTHISTGSKLTIQEHMYPAPSSPEKDQLMERRPTECMMSRSVDHLERPTSFPRPGQLICCSSVDQVNDSVYRKVLPALVIPAHYMKLPGDHSYVGQPLVVPADQQLEIERLQAELSSPHAGIFPHASSQIQAQPLSCQAISQQHLQDAGTREWTPQNASMSESLSIPASLNDAALAQMNSEVQLLTEKALLELGGGKPLPHPRAWFVSLDGRSNAHVRHSYIDLQRAGRNGSNDASLDSGVDMNEPKSARKGRGDPLPLPQNHPPVPEHAQKEPRAADSSAYTQLVYLDDTDQSGSEGGTAVGTPEDSALRCLLDGSSRRSGGQLPSLQEETTKRTSDVPPAPSASPDKRRSAQEDEDDDDDDDDDQGEGKKSPWQKREERPLMAFNIK*