Sequence detailsbmy_16413 (Coding sequence)

Part of scaffold_1333 (SequenceType object (1))

For more information consult the page for scaffold_1333 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DCLRE1CENSTTRG00000004406 (Bottlenosed dolphin)

Gene Details

DNA cross-link repair 1C

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004151, Bottlenosed dolphin)

Protein Percentage 93.03%
cDNA percentage 94.63%
Ka/Ks Ratio 0.28708 (Ka = 0.028, Ks = 0.0975)

DCLRE1CENSBTAG00000010220 (Cow)

Gene Details

protein artemis

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000013484, Cow)

Protein Percentage 83.26%
cDNA percentage 87.54%
Ka/Ks Ratio 0.29749 (Ka = 0.0829, Ks = 0.2787)

DCLRE1C (Minke Whale)

Gene Details

DNA cross-link repair 1C

External Links

Gene match (Identifier: BACU017223, Minke Whale)

Protein Percentage 95.43%
cDNA percentage 96.96%
Ka/Ks Ratio 0.41139 (Ka = 0.0162, Ks = 0.0394)

Additional orthologs identified in other species via the OPTIC pipeline.

DCLRE1C (Human)   Dclre1c (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1317 bp    Location:364498..405929   Strand:+
Raw sequence 
>bmy_16413
ATGAGCTGCTTCGAGGGGCAGATGGCCGAGTATCCAACCATCTCCATAGACCGCTTCGACCGGGAGAACCTGAGGGCCCGCGCCTACTTCCTGTCCCACTGCCACAAAGAGGAATATTTTCAGTGGAATAAGTTACCCTGTGGCATTACCTCCAAAAATAGAATTCCACTCCACACAATCAGCATTAAGCCATCCACTATGTGGTTTGGAGAAAGAGCCAGAAAAACCAACGTCATTGTGAGCTTAAAGCCTTTATGCCGATCTTCCCAAAGTACCGAGCCAAAGTATAAACCACTTGGAAAATTGAAGAGAGCAAGAACAATCCACCTAGACTCAGAGGACGACGATGACAGTGATCTCTTTGATGATCCTCTGCCAGTACCTTTAAGGCACAAGATTCCAAACCAGCAAACTCTTCGCCCTGAGGTATTGCCCACGACTGCGATTTCACAAGACCAGCCTGAAAAACGGAGAGAAAGCACAGGGTGCTTCAGAGCAGAGAGTATGCCAACAACTTTCCTTTGGGCAGACTTTATAGATTGTGAGGAATCCAACAGTGAAAGTGAAGAATCCGAAATCCCAGCTTCAGCTCAAGGAGACACGGGTCCTGTCCCCCAGCTCCAGAAGAGGGCTGATGGGGAAGTACCACAGTGGGAAGTGTTCTTTAAAAGAAGTGCTGACCTCACTGATGACTGTTTGGAGAACCTCCCGTCCTCCACAGAGGCAGGGGGCTCTCAGTCTCCGAAGCTTTTCAGTGACTCCTCTGATGGGGAATCAACTCACATCTCTTCCCAGACATCTTCTCAGTCAACACACATATCAGAACAAGGAAGTCAAGGCTGGGACAGCCAGTCCGACACTGTGCTGCTATCTTCCCAAGAGAGAAATGGGGGTATGGCCTCCTCRAGCAGACGCAYCTACAGGCCAGGAATCAAAGACAACACYCTTGCCCCTCAGACGGAACAAAMTGTACTTTGCCCAAAGGACACACACTCTGATGTGAAAACCAGAGAYCAAGACGTAAGCACAGGTTCTAGTGCTGGAGRGACGRCGACTCTWAGCAGCRGCAAGCACACGCCTCAGGAGAAAAGGCCACTAAATCCTAGCAGCAGCGCAGATTCACAAAGCTCCTCTGATTTTGAAATTCCCTCCACTCCAGAAGCCGAGCTACCGACACGAGAGCATTTACAATATTTCTATGAGAAGTTGGCAACAGGGGAGAGGATAGTAGTTGAAAAAAGAAAAAGCTCACTTCATTCTAGAGCAACCACTAAAAAACCTATACCAAGAGATAATAGTCAAAATCCTAATAGATAA

Related Sequences

bmy_16413T0 SequenceType object (3)

Length: 439 aa      View alignments
>bmy_16413T0
MSCFEGQMAEYPTISIDRFDRENLRARAYFLSHCHKEEYFQWNKLPCGITSKNRIPLHTISIKPSTMWFGERARKTNVIVSLKPLCRSSQSTEPKYKPLGKLKRARTIHLDSEDDDDSDLFDDPLPVPLRHKIPNQQTLRPEVLPTTAISQDQPEKRRESTGCFRAESMPTTFLWADFIDCEESNSESEESEIPASAQGDTGPVPQLQKRADGEVPQWEVFFKRSADLTDDCLENLPSSTEAGGSQSPKLFSDSSDGESTHISSQTSSQSTHISEQGSQGWDSQSDTVLLSSQERNGGMASSSRRXYRPGIKDNTLAPQTEQXVLCPKDTHSDVKTRDQDVSTGSSAGXTXTLSSXKHTPQEKRPLNPSSSADSQSSSDFEIPSTPEAELPTREHLQYFYEKLATGERIVVEKRKSSLHSRATTKKPIPRDNSQNPNR*