Part of scaffold_1320 (Scaffold)

For more information consult the page for scaffold_1320 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

XRCC5 ENSTTRG00000008995 (Bottlenosed dolphin)

Gene Details

X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008535, Bottlenosed dolphin)

Protein Percentage 74.43%
cDNA percentage 78.24%
Ka/Ks Ratio 0.70053 (Ka = 0.1376, Ks = 0.1964)

BT.88138 ENSBTAG00000010426 (Cow)

Gene Details

X-ray repair cross-complementing protein 5

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000013758, Cow)

Protein Percentage 74.62%
cDNA percentage 79.01%
Ka/Ks Ratio 0.4335 (Ka = 0.1999, Ks = 0.461)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1575 bp    Location:479458..563681   Strand:+
>bmy_16453
ATGGCGCGGTCGGGGAATAAGGCAGCTGTGGTGCTGTGTATGGATGTGCGTTTTGCCATGAGTAACTCCTTTCCTGGTGAAGAATCCCCATTTGAACTAGCAAAGAAGGTGATGACCATGTTTGTGCAGCGACAGGTGTTTGCTGAGAGCAAGGATGAAATCGCGTTAGTCCTTTTCGGTACAGATGGCACGGAGAACGCCCTTGCTGGTGAGGACCAGTATCAGAACATCACAGTGCGCAGACACCTGATGCTGCCGGATTTTGACTTGCTGGAGGACATTGAAAGCAAAATCCAACCAGGTTCTCAACAAGCTGACTGTATCCTTTTTCAACCAGAGAAGACTCTTAAGAAATTTCCTTTAATCTGGGGAATTCTGAGTTCTGGATGCCCTCATTGTGTGCATGGATTTGATTCAACAAGAAACTGTTTGGACTGGACCTTCCTGACCTTTCATTTTCATCTTAATCGTCCCTTCTTCCTGGTTGATGCTCTGGAAACAGCAATAGCCTGGTGCAAACCTGATGTGCCATACCCTGCTCGCTGGAAGCTCTTTTTCATTGAGAGTCTGAGACAGCTGTGTATCTTTAAGAAAATTGAGAGGCGTTCCATACCCTGGCCCTGTCAACTGACCATTGGCTCCAATTTGTCTATAAAGATTGTGGCTTACAAATCGATTCTACAAGAGAAAGTTAAAAAGTGTTGGACAGTTGTGGATGCAAGAACTCAAAAAAAAGAAGATATACAAAAAGAAACAGTTTATTGCTTGAATGACGATGATGAAACTGAAGTTCCAAAAGAGGATACTATTCAAGGGTTCCGCTATGGGAGTGATATCATTCCTTTCTCTAAAGTGGATGAGGAACAAATGAAATATAAATCGGAGGGGAAGTGCTTCTCTGTTCTGGGATTTTGTAGATCTTCTCAGGTCCACATGAAATATTTTATGGGAAATCAAGTTCTAAAGGTCTTTGCAGCAAAAGATGATGAGGCGGCAGCAGTTGCCCTTTCCTCCCTGATTCATGCTTTGGATGAATTAGACATGGTGGCCGTAGTTCGATATGCTTATGACAGAAGAGCTAATCCTCAAGTTGGCGTGGCTTTTCCTTATATCAGGGATGCCTATGAGTGTTTAGTGTACGTACAGCTGCCTTTCATGGAAGACTTGCGGCAGTACATGTTTTCATCCTTGAAAAATAATGGGAAATGCACTCCCACAGAGGCGCAGTTGAGTGCTGTTGATGCTTTGATTGACTCCATGAGCTTGGTAAAGAAAGATGAAGAGGAGGGCACCATTGAAGACTTATTTCCAACCAGCAAAATCCCAAATCCTCAATTTCAGAGATTATTTCAGGTTGGAAGTGTGAATCCTGCTGAAAACTTCCGTGTTCTAGTGAGGCAGAAGAAGACCAGCTTTGAGGAAGCAAGTCACCAGTTAATAAATCACATTGAGCAGTTTTTGGATACTAACGAAACACTGTATTTTATGAAGAGCATGGACTGTATCAGAGTCTTCCGGGAAGAAGCCATTCAGCATATTGCAGAGAGAAAGAACATAAGAAAAGTCAAGRGTTGA

Related Sequences

bmy_16453T0 Protein

Length: 525 aa      View alignments
>bmy_16453T0
MARSGNKAAVVLCMDVRFAMSNSFPGEESPFELAKKVMTMFVQRQVFAESKDEIALVLFGTDGTENALAGEDQYQNITVRRHLMLPDFDLLEDIESKIQPGSQQADCILFQPEKTLKKFPLIWGILSSGCPHCVHGFDSTRNCLDWTFLTFHFHLNRPFFLVDALETAIAWCKPDVPYPARWKLFFIESLRQLCIFKKIERRSIPWPCQLTIGSNLSIKIVAYKSILQEKVKKCWTVVDARTQKKEDIQKETVYCLNDDDETEVPKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCRSSQVHMKYFMGNQVLKVFAAKDDEAAAVALSSLIHALDELDMVAVVRYAYDRRANPQVGVAFPYIRDAYECLVYVQLPFMEDLRQYMFSSLKNNGKCTPTEAQLSAVDALIDSMSLVKKDEEEGTIEDLFPTSKIPNPQFQRLFQVGSVNPAENFRVLVRQKKTSFEEASHQLINHIEQFLDTNETLYFMKSMDCIRVFREEAIQHIAERKNIRKVKX*