Part of scaffold_1321 (Scaffold)

For more information consult the page for scaffold_1321 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NR1H4 ENSTTRG00000016373 (Bottlenosed dolphin)

Gene Details

nuclear receptor subfamily 1, group H, member 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015517, Bottlenosed dolphin)

Protein Percentage 98.94%
cDNA percentage 98.23%
Ka/Ks Ratio 0.08441 (Ka = 0.0059, Ks = 0.0702)

BT.48865 ENSBTAG00000013596 (Cow)

Gene Details

bile acid receptor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000018079, Cow)

Protein Percentage 97.53%
cDNA percentage 96.23%
Ka/Ks Ratio 0.06651 (Ka = 0.0106, Ks = 0.1588)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 852 bp    Location:568538..548150   Strand:-
>bmy_16466
ATGGACATGTACATGCGAAGGAAGTGCCAAGAGTGTCGACTAAGGAAATGCAAAGAGATGGGAATGTTGGCTGAATGCTTGTTAACTGACATTCAGTGTAAATCTAAAAGACTGAGGAAAAACGTGAAGCAGCACGCAGATCAGACCATTAATGAAGACAGTGAAGGACGTGACTTGCGACAAGTGACCTCGACAACTAAGTCATGCAGGGAGAAAACTGAACTCACCCCAGATCAACAGAATCTTCTTCATTATATTATGGATTCATACAGCAAGCAGAGGATGCCTCAGGAAATAACAAATAAAATTTTAAAAGAAGAATTCAGTGCAGAAGAAAATTTTCTCATTTTAACTGAAATGGCTACCAGTCATGTACAGATTCTCGTAGAATTCACAAAAAAACTTCCAGGGTTTCAGACATTGGACCATGAAGATCAGATTGCTTTGCTGAAAGGGTCCGCAGTTGAAGCTATGTTTCTCCGTTCAGCTGAGATTTTCAGTATCTCTGATGAATATATTACGCCTATGTTTAGTTTTTATAAAAGTGTTGCAGAATTGAAAATGACTCAAGAAGAGTATGCTCTCCTTACAGCAATTGTTATTCTCTCTCCAGACAGACAATACATTAAGGACAGAGAGGCAGTAGAGAAGCTTCAGGAACCACTGCTTGATGTGCTACAAAAGTTGTGTAAGATTCATCAGCCTGAAAATCCTCAACATTTTGCCTGTCTTCTGGGTCGCCTGACTGAGTTGCGGACATTCAACCATCACCACGCAGAGATGCTTATGTCATGGAGAGTGAATGACCACAAGTTTACCCCGCTTCTCTGTGAAATCTGGGATGTGCAGTGA

Related Sequences

bmy_16466T0 Protein

Length: 284 aa      View alignments
>bmy_16466T0
MDMYMRRKCQECRLRKCKEMGMLAECLLTDIQCKSKRLRKNVKQHADQTINEDSEGRDLRQVTSTTKSCREKTELTPDQQNLLHYIMDSYSKQRMPQEITNKILKEEFSAEENFLILTEMATSHVQILVEFTKKLPGFQTLDHEDQIALLKGSAVEAMFLRSAEIFSISDEYITPMFSFYKSVAELKMTQEEYALLTAIVILSPDRQYIKDREAVEKLQEPLLDVLQKLCKIHQPENPQHFACLLGRLTELRTFNHHHAEMLMSWRVNDHKFTPLLCEIWDVQ*