Part of scaffold_1307 (SequenceType object (1))

For more information consult the page for scaffold_1307 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TNFSF10ENSTTRG00000013167 (Bottlenosed dolphin)

Gene Details

tumor necrosis factor (ligand) superfamily, member 10

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000012493, Bottlenosed dolphin)

Protein Percentage 97.4%
cDNA percentage 96.78%
Ka/Ks Ratio 0.21127 (Ka = 0.0205, Ks = 0.0972)

BT.20790ENSBTAG00000018994 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000025281, Cow)

Protein Percentage 81.45%
cDNA percentage 88.85%
Ka/Ks Ratio 0.53524 (Ka = 0.1029, Ks = 0.1922)

TNFSF10 (Minke Whale)

Gene Details

tumor necrosis factor (ligand) superfamily, member 10

External Links

Gene match (Identifier: BACU017811, Minke Whale)

Protein Percentage 98.56%
cDNA percentage 99.28%
Ka/Ks Ratio 0.6073 (Ka = 0.0064, Ks = 0.0105)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 834 bp    Location:349120..332781   Strand:-
>bmy_16471
ATGGCCCTGATGCAGGCTCCAGGGGGCCCCAGCCCTGGGCAGACCTGCGCACTGATCCTCATCTTCACGGTGCTCCTGCAGGCCCTCTGTGTGGCCGTGACTTACGTGTACTTCACCAACGAGCTGAAGCAGATGCAGGACAAGTACTCCAAAAGTGGCATAGCCTGCTTCTTAAAGGACGATGACAGTTCTTGGGATGCCAGTGATGACGAGAGTATGATCAACCCCTGCTGGCATATCATTTTGAGAACCTATGAGGAAACCATTCCTTCAATTCCAGAAAAGCAACAAAATATTCCTCACCTAGAAAGAGAAAAAGGTCCTCAGAGGGTAGCTGCTCACATAACTGGGACCAATCGGAAAAGCACATTCTCAGTTCTAAGCTCCAAGAATGAAAAAGCTTTGGGCCAGAAAATAAATTCCTGGGAGTCGTCAAGAAAAGGACATTCATTCTTGAATAATTTGCACTTGAGGAATGGAGAGCTGGTTATCCACCAAACAGGGTTTTATTACATCTATTCCCAAACATACTTTCGATTTCAGGAAACTGATGCGGTTTTGGGAACAGTTTCAACAGAAGAGAACAGAAAGAAAAACAAACAAATGGTACAATATATTTACAAATGCACAGGCTATCCTGACCCCATACTGCTGATGAAAAGTGCTAGAAATAGTTGTTGGTCTAAAGATTCAGAATATGGACTCTATTCCATCTATCAAGGTGGAATATTTGAGCTTAAGGAAAATGATCGAATTTTTGTCTCTGTAACTAATGAGCAATTGATTGACATGGACCAAGAAGCTAGTTTTTTCGGGGCCTTTTTAATTGGCTAA

Related Sequences

bmy_16471T0 SequenceType object (3)

Length: 278 aa      View alignments
>bmy_16471T0
MALMQAPGGPSPGQTCALILIFTVLLQALCVAVTYVYFTNELKQMQDKYSKSGIACFLKDDDSSWDASDDESMINPCWHIILRTYEETIPSIPEKQQNIPHLEREKGPQRVAAHITGTNRKSTFSVLSSKNEKALGQKINSWESSRKGHSFLNNLHLRNGELVIHQTGFYYIYSQTYFRFQETDAVLGTVSTEENRKKNKQMVQYIYKCTGYPDPILLMKSARNSCWSKDSEYGLYSIYQGGIFELKENDRIFVSVTNEQLIDMDQEASFFGAFLIG*