Part of scaffold_1313 (Scaffold)

For more information consult the page for scaffold_1313 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CLCA1 ENSTTRG00000000003 (Bottlenosed dolphin)

Gene Details

chloride channel accessory 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000003, Bottlenosed dolphin)

Protein Percentage 95.8%
cDNA percentage 97.55%
Ka/Ks Ratio 0.6148 (Ka = 0.0215, Ks = 0.035)

CLCA1 ENSBTAG00000008161 (Cow)

Gene Details

calcium-activated chloride channel regulator 1 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010730, Cow)

Protein Percentage 88.7%
cDNA percentage 92.02%
Ka/Ks Ratio 0.36685 (Ka = 0.0597, Ks = 0.1626)

Genome Location

Sequence Coding sequence

Length: 2007 bp    Location:131658..117110   Strand:-
>bmy_16488
GTGGTTGAATTCTGTACAGAAAAAAACCACAATAAAGGAGCCCCAAACCAGCAAAACAGAAAATGCAATCTCCGAAGCACATGGGAAGTGATCCAAGATTCAGAGGACTTTAAGAAAACCACTCCTATGACAACACAGCCACCCAAGCCCACCTTCTCACTGTTGCAGATCGGACAAAGAATTGTGTGTTTAGTCCTTGATAAGTCTGGAAGCATGACGATTGGTGACCGCCTTAAACGACTGAATCAAGCAGGCAAACTTTTCCTTCTGCAGACGGTTGAGCAAGGGTCCTGGGTTGGGATGGTGACGTTTGACAGTGCTGCCTATGTAAAAAGTGAACTTGTACAGATAAACAGTGCCACTGAAAGAGACACACTTACCAGAAGCTTACCCACAGCGGCCTCAGGAGGAACGTCCATCTGCTCTGGGATTCAATCAGCATTTACGGTGATTAGGAAGAAATACCCAACAGATGGATCTGAAATCGTGTTACTGACCGATGGGGAGGACAACACTATAAGCTCATGCTTTAATGAGGTGAAACAAAGCGGAGTCATCATCCATACAGTTGCCCTAGGGCCGTCTGCAGCACAGGAACTAGAGGAGCTGTCTAAAATGACAGGAGGTTTACGGACATACGCTTCAGATCAGGTTCAGAACAATGGCCTCATGGATGCTTTTGGGGCCCTTTCATCAGGAAATGGAGCTGTCTCCCAGCGTTCCATCCAGCTTGAGAGCAGGGGATTAACCCTCCAGAACAGTCAGTGGTTGAATGGCACAGTGATTGTGGACAGTACTGTGGGGAAAGACACTTTGTTTCTCATCACCTGGACAACTGACACTCCCCAAATCCTTCTCTGGGATCCCAGCGGAAAGAAACAAGATGGCTTTTTAGTGGACACACACATCAAAATGGCCTACCTCCAAATCCCAGGCACTGCCAAGGTCGGCATTTGGAAATACAGCCTACAAGCAAGGTCACAAACCCTGACTTTGACTGTCACCTCCCGTGCATCAAGTGGTACCTTGCCTCCAGTTACAGTGACCTCTAAAATGAACAAAGACACAGGCAAATTCCCTAGCCCTATGGTAGTTTATGCAAAGATTCACCAAGGAGCCTTGCCAATTCTCAGGGCCAAGGTCACAGCCCTGATAGAATCAGTGAATGGAAAAACAGTTACTTTGGAATTACTGGACAACGGAGCAGGTGCCGATGCTACTAAGGATGATGGTGTCTATTCAAGGTATTTTACAGCTTACGATACAAATGGTAGATACAGTGTAAAAGTGTGGGCTCTGGGAGGTGTCAATACAGACACTCAGAAGGGGATACCCCAGCAGACTGGAGCCATGTACATACCTGGCTGGATCGAGAATGGTCAAGTAAAATGGAATCCACCAAGACCTGAAATTAATAAGGATGATCTTCAAGGCAAGCAAGAGTGTTTCAGCAGAACGTCCTCGGGAGGTTCATTTGTGGCCTCCAATGTTCCAAAGGCTCCCATACCTGATCTCTTTCCGCCTTGTAAAATCACTGACCTGAAGGCAAAAATCCAAGGGGACAGTCTCATTAATCTGACTTGGACGGCTCCTGGGGATGATTATGATAACGGAAGAGCTCACAAGTACATCATTGGAATAAGCACAAATATTCTTGATCTCAGAGACAAGTTCAATGATTCACTTCAAGTGAACACCACTGACCTCATCCCAAAGGAGGCCAACTCAGAGGAAGTCTTTGTGTTTAAACCAGAAAACATCACTTTTACAAATGGCACAGATCTCTTCATTGCTGTACAGGCTGTTGATAAGGTCAACCTGAAGTCAGAAATCTCTAACATTGCACAAGTATCTTTGTTTATTCCCCCAGAGAATCCTCCAGAGACACCTAGTCCTTCTCTTCCTTGTCCTGATATTAATATCAACAGCACCATTCCTGGCATTCACATTTTAAAAATTATGTGGAAGTGGCTAGGGGAATTACAGCTATCAGTAGCCTTGGGCTGA

Related Sequences

bmy_16488T0 Protein

Length: 669 aa      View alignments
>bmy_16488T0
VVEFCTEKNHNKGAPNQQNRKCNLRSTWEVIQDSEDFKKTTPMTTQPPKPTFSLLQIGQRIVCLVLDKSGSMTIGDRLKRLNQAGKLFLLQTVEQGSWVGMVTFDSAAYVKSELVQINSATERDTLTRSLPTAASGGTSICSGIQSAFTVIRKKYPTDGSEIVLLTDGEDNTISSCFNEVKQSGVIIHTVALGPSAAQELEELSKMTGGLRTYASDQVQNNGLMDAFGALSSGNGAVSQRSIQLESRGLTLQNSQWLNGTVIVDSTVGKDTLFLITWTTDTPQILLWDPSGKKQDGFLVDTHIKMAYLQIPGTAKVGIWKYSLQARSQTLTLTVTSRASSGTLPPVTVTSKMNKDTGKFPSPMVVYAKIHQGALPILRAKVTALIESVNGKTVTLELLDNGAGADATKDDGVYSRYFTAYDTNGRYSVKVWALGGVNTDTQKGIPQQTGAMYIPGWIENGQVKWNPPRPEINKDDLQGKQECFSRTSSGGSFVASNVPKAPIPDLFPPCKITDLKAKIQGDSLINLTWTAPGDDYDNGRAHKYIIGISTNILDLRDKFNDSLQVNTTDLIPKEANSEEVFVFKPENITFTNGTDLFIAVQAVDKVNLKSEISNIAQVSLFIPPENPPETPSPSLPCPDININSTIPGIHILKIMWKWLGELQLSVALG*