Sequence details bmy_16505 (Coding sequence)

Part of scaffold_1349 (Scaffold)

For more information consult the page for scaffold_1349 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PSEN2 ENSTTRG00000008021 (Bottlenosed dolphin)

Gene Details

presenilin 2 (Alzheimer disease 4)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007589, Bottlenosed dolphin)

Protein Percentage 97.54%
cDNA percentage 97.84%
Ka/Ks Ratio 0.13986 (Ka = 0.0077, Ks = 0.0547)

PSEN2 ENSBTAG00000013197 (Cow)

Gene Details

Presenilin-2 Presenilin-2 NTF subunit Presenilin-2 CTF subunit

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000017565, Cow)

Protein Percentage 97.54%
cDNA percentage 93.9%
Ka/Ks Ratio 0.02582 (Ka = 0.0104, Ks = 0.4008)

Additional orthologs identified in other species via the OPTIC pipeline.

PSEN2 (Human)   Psen2 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1347 bp    Location:348152..322080   Strand:-
Raw sequence 
>bmy_16505
ATGCTCACATTCATGGCCTCTGACAGCGAGGAAGAAGTGTGTGATGAGCGGACGTCCCTGATGTCAGCCGAGAGCCCCATGCCGCGCTCCTGCCAGGAAGGCAGGCAGGGCCTGGAGAATGGAGAGGGTGCCGCCCAGTGGAGAGGCCAGGAGAGCGAGGAGGACCATGAGGAGGACCCTGACCGCTACGCCTGCAGCGGGGTCCCCGGGCGGCCACCAGGCCTGGAGGAGGAGCTGACCCTGAAATATGGGGCAAAGCACGTGATCATGCTATTTGTGCCTGTCACGCTGTGCATGATCGTGGTGGTGGCCACCATCAAGTCTGTGCGCTTCTACACGGAGAAGAATGGACAGCTCATCTACACACCTTTCACCGAGGACACACCTTCGGTGGGCCAGCGCCTCCTCAACTCCGTGCTCAACACCCTCATCATGATCAGCGTCATTGTCATCATGACCATCTTCCTGGTCGTGCTCTACAAGTACCGCTGCTACAAGTTCATCCACGGCTGGCTGATCGTGTCCTCCCTGATGCTGCTGTTCCTCTTCACCTACATCTACCTTGGGGAAGTGCTCAAGACCTACAATGTGGCCATGGACTACCCCACCCTGTTCCTGACCGTCTGGAACTTCGGGGCGGTGGGCATGGTGTGCATCCACTGGAAGGGCCCCTTGGTGCTGCAGCAGGCCTATCTCATCATGATCAGCGCGCTCATGGCCTTGGTGTTCATCAAGTACCTCCCAGAGTGGTCTGCGTGGGTCATCCTGGGCGCCATCTCTGTGTATGATCTCGTGGCTGTGCTGTGCCCCAAAGGGCCGCTGAGAATGCTGGTAGAAACTGCCCAGGAGAGAAACGAGCCCATATTTCCTGCCCTGATATATTCATCCGCCATGGTGTGGACAGTGGGCATGGCCAAGTTGGACCCCTCCTCTCAGGGAGCCCTTCAGCTCCCCTACGACCCAGAGATGGAAGAGGACTCCTATGACAGTTTGGGGGAGCCCTCGTACCCTGAAGTCTTTGAGCCCCCCCTGCCTGGCTACCCGGGGGAGGAGCTGGAGGAGGAGGAGGAAAGGGGCGTGAAGCTCGGCCTCGGAGACTTCATCTTCTACAGCGTGCTGGTGGGCAAGGCGGCAGCCACGGGCAGTGGGGACTGGAACACCACGCTGGCCTGCTTTGTGGCCATCCTCATCGGTTTGTGTCTGACCCTCCTGCTGCTCGCCGTGTTCAAGAAAGCGTTGCCTGCCCTCCCCATCTCCATCACGTTCGGGCTGATCTTCTACTTCTCCACAGACAACCTGGTACGGCCTTTCATGGACACCCTGGCCTCCCATCAGCTCTACATCTGA

Related Sequences

bmy_16505T0 Protein

Length: 449 aa      View alignments
>bmy_16505T0
MLTFMASDSEEEVCDERTSLMSAESPMPRSCQEGRQGLENGEGAAQWRGQESEEDHEEDPDRYACSGVPGRPPGLEEELTLKYGAKHVIMLFVPVTLCMIVVVATIKSVRFYTEKNGQLIYTPFTEDTPSVGQRLLNSVLNTLIMISVIVIMTIFLVVLYKYRCYKFIHGWLIVSSLMLLFLFTYIYLGEVLKTYNVAMDYPTLFLTVWNFGAVGMVCIHWKGPLVLQQAYLIMISALMALVFIKYLPEWSAWVILGAISVYDLVAVLCPKGPLRMLVETAQERNEPIFPALIYSSAMVWTVGMAKLDPSSQGALQLPYDPEMEEDSYDSLGEPSYPEVFEPPLPGYPGEELEEEEERGVKLGLGDFIFYSVLVGKAAATGSGDWNTTLACFVAILIGLCLTLLLLAVFKKALPALPISITFGLIFYFSTDNLVRPFMDTLASHQLYI*