Part of scaffold_1344 (Scaffold)

For more information consult the page for scaffold_1344 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

COL5A1 ENSTTRG00000009041 (Bottlenosed dolphin)

Gene Details

collagen, type V, alpha 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008672, Bottlenosed dolphin)

Protein Percentage 79.34%
cDNA percentage 79.1%
Ka/Ks Ratio 0.58388 (Ka = 0.0619, Ks = 0.106)

COL5A1  (Minke Whale)

Gene Details

collagen, type V, alpha 1

External Links

Gene match (Identifier: BACU016175, Minke Whale)

Protein Percentage 88.85%
cDNA percentage 89.97%
Ka/Ks Ratio 0.6768 (Ka = 0.0951, Ks = 0.1406)

Genome Location

Sequence Coding sequence

Length: 2937 bp    Location:464412..526060   Strand:+
>bmy_16514
ATGGGGCCTCAGGGTCCCCGGGGTTTGCAGGGCCCACCTGGCCCGTCAGGAAAGCCTGGAAGAAGGGGGCGAGCTGGCAGCGACGGAGCAAGAGGGATGCCTGGACAGACCGGCCCCAAGGGTGACCGCGGCTTCGATGGCCTGGCTGGGCTGCCGGGAGAGAAGGGCCACCGGGGCGACCCTGGTCCTTCCGGCCCTCCGGGAACTCCAGGGGAAGACGGAGAAAGGGGTGACGATGGAGAAGTCGGGCCCAGAGGGCTGCCCGGGGAGCCTGGTGTGACGGGAATGGACGGCCAACCAGGCCCGAAGGGCAATGTGGGTCCCCAGGGAGAGCCCGGCCCCCCGGGACAGCAGGGTAATCCAGGCGCCCAGGGTCTTCCGGGCCCCCAGGGTGCAATCGGACCTCCAGGAGAAAAGGGGCACCCTGGCAAAGAAGGCCCTCCGGGAGAGAAGGGAGGCCAGGGTCCGCCCGGCCCCCAGGGCCCCATCGGCTACCCAGGCCCTCGTGGAGTCAAGGGGGCGGACGGCATCCGAGGTCTGAAGGGCACCAAGGGCGAGAAGGGTGAAGATGGCTTTCCGGGCTTCAAAGGAGACATGGGCATCAAGGGAGATCGGGGGGAGATCGGCCCACCTGGTCCCAGAGGGGAGGACGGTCCCGAAGGCCCCAAGGGTCGTGGAGGTCCGAACGGCGACCCGGGTCCTCTGGGACCCCCTGGGGAGAAGGGTTCTATCGGATTTCCTGGATTTCCTGGCGCCAATGGAGAGAAGGGTGGCCGGGGACCCAACGGACCCCAAGGACCCACGGGGTTCCCTGGACCAAAGGGTCCCCCGGGACCCCCGGGCAAGGATGGGCTCCCGGGACACCCTGGGCAGAGAGGAGAGACGGGTTTCCAAGGCAAGACCGGCCCTCCAGGCCCACCGGGTGTGGTCGGCCCTCAGGGTCCCACGGGAGAAACTGGTCCCATGGGTGAGCGTGGCCACCCTGGGCCCCCGGGCCCCCCTGGTGAACAAGGGCTCCCGGGCCTGGCCGGAAAAGAAGGGACGAAGGGTGACCCAGGCCCCGCCGGCCTTCCTGGAAAAGATGGCCCCCCAGGGCTACGTGGCTTCCCCGGGGACCGAGGGCTTCCTGGTCCAGTGGGATCTCCAGGGGAGAGAGGTCCGGCCGGTGCTGCTGGGCCCATCGGAATTCCAGGGAGACCTGGGCCCCAGGGACCTCCCGGGCCGGCTGGGGAGAAAGGAACTCCTGGCGAGAAAGGTCCACAAGGCCCAGCTGGCCGAGACGGTCTACAGGGTCCCGTGGGGCTCCCTGGTCCAGCTGGCCCTGTGGGTCCCCCTGGAGAAGATGGAGATAAGGGGGAGATCGGGGAGCCGGGACAGAAGGGGAGCAAGGGAGACAAAGGCGAACAGGGTCCACCTGGGCCTACAGGACCTCAAGGCCCCATCGGACAGCCAGGCCCCTCTGGAGCTGACGGCGAGCCGGGTCCTCGAGGCCAGCAGGGCCTTTTTGGGCAGAAAGGTGATGAAGGTCCAAGAGGTTTTCCCGGGCCCCCGGGACCCGTGGGGCTGCAGGGTCTGCCGGGACCTCCAGGAGAGAAGGGCGAGACGGGAGATGTGGGGCAGATGGGTCCCCCAGGTCCCCCCGGCCCCCGAGGACCCTCCGGAGCTCCAGGTGCTGACGGGCCGCAAGGTCCCCCAGGTGGAATAGGCAATCCTGGTGCAGTGGGAGAGAAGGGTGAGCCCGGCGAAGCTGGAGAGCCTGGCCTTCCCGGCGAAGGGGGCCCCCCGGGACCCAAAGGCGAAAGGGGAGAGAAGGGTGAGTCGGGCCCTTCTGGTGCTGCTGGACCCCCTGGACCCAAGGGCCCTCCCGGAGACGACGGTCCCAAAGGCAGCCCCGGCCCGGTCGGTTTTCCCGGAGATCCCGGTCCCCCCGGAGAGCCCGGCCCCGCGGGTCAAGACGGTCCCCCTGGTGACAAAGGAGATGACGGTGAATCCGGACAAACGGGATCCCCGGGCCCAACTGGTGAACCAGGTCCATCTGGGCCTCCGGGAAAAAGGGGTCCCCCCGGCCCCCTAGGTCCCGAAGGCAGGCAGGGAGAGAAAGGAGCTAAGGGAGAAGCAGGCTTGGAAGGCCCTCCTGGGAAGACTGGCCCCATTGGCCCCCAGGGGGCCCCTGGGAAGCCCGGGCCCGATGGCCTGCGAGGGATCCCTGGCCCTGTGGGTCCCCCAGGACTCCCTGGCCTCAAAGGAGACTCTGGACCCAAAGGAGAAAAGGGACATCCAGGCTTGATCGGGCTCATCGGACCTCCGGGCGAACAGGGAGAAAAGGGTGACCGCGGTCTCCCCGGCCCCCAGGGCTCCTCTGGCCCTAAGGGAGAACAGGGTCCAACTGGCCCGAAGGGTGAAGCAGGCCAGCCAGGACCCCCTGGCCTGCCGGGCCCCCCGGGCGAGGTCATCCAGCCGCTGCCGATCCAGGCGTCCAGGACCCGGCGGAACATCGACGCCAGCCAGCTGATGGGCGACGGAGAGGGCGGGCATTACATGGACTACGCGGACGGCATGGAGGAGATCTTCGGCTCCCTCAACTCGCTGAAGCTGGAGATCGAGCAGATGAAGCGGCCCCTGGGCACGCAGCAGAACCCCGCACGCACCTGCAAAGACCTTCAGCTCTGCCACCCTGACTTCCCCGACGGTGAATACTGGGTGGATCCGAACCAAGGCTGCTCCAGGGACTCCTTCAAAGTCTACTGCAACTTCACAGCCGGGGGGTCGACGTGCATCTTCCCCGACAAGAAGTCCGAGGGGGCCAGAATCACTTCTTGGCCCAAAGAAAACCCGGGTTCCTGGTTCAGTGAATTCAAGCGTGGCAAACTGGTAAGACGGCCTCTGACTTGTGTGCAGTGTCGGTTAAACCCACCCGTTTCGTATCTTGCAGAGTAA

Related Sequences

bmy_16514T0 Protein

Length: 979 aa     
>bmy_16514T0
MGPQGPRGLQGPPGPSGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGTPGEDGERGDDGEVGPRGLPGEPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKGSIGFPGFPGANGEKGGRGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGSPGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGTPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGESGQTGSPGPTGEPGPSGPPGKRGPPGPLGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKGEQGPTGPKGEAGQPGPPGLPGPPGEVIQPLPIQASRTRRNIDASQLMGDGEGGHYMDYADGMEEIFGSLNSLKLEIEQMKRPLGTQQNPARTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAGGSTCIFPDKKSEGARITSWPKENPGSWFSEFKRGKLVRRPLTCVQCRLNPPVSYLAE*