Part of scaffold_1330 (Scaffold)

For more information consult the page for scaffold_1330 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LSG1 ENSTTRG00000000559 (Bottlenosed dolphin)

Gene Details

large subunit GTPase 1 homolog (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000525, Bottlenosed dolphin)

Protein Percentage 95.62%
cDNA percentage 96.46%
Ka/Ks Ratio 0.27774 (Ka = 0.0215, Ks = 0.0773)

LSG1 ENSBTAG00000008461 (Cow)

Gene Details

large subunit GTPase 1 homolog

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011134, Cow)

Protein Percentage 92.93%
cDNA percentage 92.54%
Ka/Ks Ratio 0.18086 (Ka = 0.0367, Ks = 0.2027)

LSG1  (Minke Whale)

Gene Details

large 60S subunit nuclear export GTPase 1

External Links

Gene match (Identifier: BACU016493, Minke Whale)

Protein Percentage 94.56%
cDNA percentage 94.95%
Ka/Ks Ratio 0.38041 (Ka = 0.0374, Ks = 0.0982)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1989 bp    Location:33498..8346   Strand:-
>bmy_16521
ATGCACAAGTTTGGAAGTCCAAAAACCAGGAGCGGGTCCGGCAAGGAAGATTTGTACGCCGACGGGGCAGCTATGGGTCGGAGGAGGGCGCCGGAGGCTGGGACCCTGGGCCGGGCTCTTATCCGCCAGCAAGTTCAGCGGAGCCGTAGCCATCGTCACACCGACTCCTGGTTGCACACAAGTGAACTCAATGATGGCTATGATTGGGGTCGTCTTAATCTTCAGTCCGTGACTGAACAGAGCTCCCTGGATGACTTCCTTGCCACTGCGGAACTTGCAGGAACAGAGTTTGTAGCTGAGAAGCTTAATATTAAATTTGTGCCTCCTGAGGCTAGAACTGGACTACTGTCTTTTGAGGAGAACCAGAGAATTAAGAAACTCCATGAAGAAAACAAGCAGTTCTTGTGTATCCCAAGGAGACCAAAGTGGGACCAAAAAACTAGCCCAGAAGAACTCAAACAGGCAGAGAAAGATAACTTTCTAGAATGGAGACGTCAACTTGTCCGGGAAATGGTAGATTTCATCTTACAAGTGCAAATTGGTGTGTGTGCAAACCGCATTGCTTTGTGCACATGCGTCCTTGCACAAAGATGGTTGGAAGAGGAACAAGACCTGATATTGACTCCATTTGAAAGAAATTTGGATTTTTGGCGCCAGCTCTGGAGGGTGATTGAAAGAAGTGATATCGTGGTCCAGATAGTAGATGCTCGAAATCCACTCCTATTTAGGTGTGAGGATTTGGAATGTTATGTGAAAACAATTGATGACAACAAGGAGAATATTATTCTGATAAATAAGGCTGACTTGCTGACTACCGAGCAGCGGAGTGCCTGGGCCGAGTTCTTCGAAAAGGAAAATGTGAAAGTCATTTTCTGGTCGGCTTTGTCTGAAGCCATTCAACTGATCGGTGACTCTAAGGAAGAAGTAAACGGAGACAGTGGAGAAGCCATCACAGCTGAGTTTGAAAACTCCAGTTGTGACGAAGCTGAAATTCTACACGAAGAGACTGAACATCTTTCACTTAATGAGGTTGGCAGGAGTGATGAAGATGACAGCGAGTATGAGGACTGTCGGGAGGAGGAGGAGGAGGATTGGCAGACGTGTTCAGAAGAGGGCAGCAGCCCTGACGAGGAGGCCTGTGGCCAGGATTGGCAGGAAAGCTGCACTGTGGATTCTGAGGCTCAAGGAAGGAAAACCCCACAGAAGAGGCAAATATGCAATTTTAGCCACCTGGTATCAAAGCAGGAATTACTGGAGATCTTTAAGCAGCTACACTCTGGAAAGAAGGTGAAGAATGGACAACTTACTGTTGGACTGGTGGGCTACCCAAACGTTGGTAAGAGTTCGACAGTCAACACCATAATGGGCAATAAGAAGGTGTCTGTGTCTGCCACACCCGGTCACACCAAGCATTTTCAGACTCTCTATGTGGAACCTGGCCTCTGCTTATGTGACTGCCCAGGCCTGGTGATGCCATCCTTTGTCTCTACCAAAGCCGAGATGATTTGCAGTGGAATCCTCCCGATTGACCAGATGAGAGATCACCTCCCACCTATATCACTAATATCCTCTGTGCTGTGCCAAAATTTTGGTTGTTATTCTTACATTTGCCAGAATATTCCAAGACGTGTTTTAGAAGCTACGTATGGCATTGACATCATAAAGCCTAGAGAAGATGAAGATCCCCAGCGACCTCCAACGTCAGAAGAACTGTTGACGGCTTATGGATGTATGCGAGGATTCATGACAGCACATGGACAGCCAGACCAACCTCGATCTGCACGCTACATCCTGAAGGATTATGTCAATGAAAATGTGAGAGCTTTGACCAAAGGAGTCCAGGCTGTGATGGGCTACAAGCCTGGGAGTGGCCTGGTGACGGCAGCTACTGTGAGCTCTGAGACGGGGSCTGGGAAGCCCTGGAAAAAACATGGCAACAGAAATAAAAAAGAGAAAAGTCGTAGACTCTATAAGCACCTGGATACGTGA

Related Sequences

bmy_16521T0 Protein

Length: 663 aa      View alignments
>bmy_16521T0
MHKFGSPKTRSGSGKEDLYADGAAMGRRRAPEAGTLGRALIRQQVQRSRSHRHTDSWLHTSELNDGYDWGRLNLQSVTEQSSLDDFLATAELAGTEFVAEKLNIKFVPPEARTGLLSFEENQRIKKLHEENKQFLCIPRRPKWDQKTSPEELKQAEKDNFLEWRRQLVREMVDFILQVQIGVCANRIALCTCVLAQRWLEEEQDLILTPFERNLDFWRQLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKTIDDNKENIILINKADLLTTEQRSAWAEFFEKENVKVIFWSALSEAIQLIGDSKEEVNGDSGEAITAEFENSSCDEAEILHEETEHLSLNEVGRSDEDDSEYEDCREEEEEDWQTCSEEGSSPDEEACGQDWQESCTVDSEAQGRKTPQKRQICNFSHLVSKQELLEIFKQLHSGKKVKNGQLTVGLVGYPNVGKSSTVNTIMGNKKVSVSATPGHTKHFQTLYVEPGLCLCDCPGLVMPSFVSTKAEMICSGILPIDQMRDHLPPISLISSVLCQNFGCYSYICQNIPRRVLEATYGIDIIKPREDEDPQRPPTSEELLTAYGCMRGFMTAHGQPDQPRSARYILKDYVNENVRALTKGVQAVMGYKPGSGLVTAATVSSETGXGKPWKKHGNRNKKEKSRRLYKHLDT*