Part of scaffold_1330 (Scaffold)

For more information consult the page for scaffold_1330 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

XXYLT1 ENSTTRG00000015821 (Bottlenosed dolphin)

Gene Details

xyloside xylosyltransferase 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014990, Bottlenosed dolphin)

Protein Percentage 71.36%
cDNA percentage 76.21%
Ka/Ks Ratio 0.32003 (Ka = 0.2283, Ks = 0.7135)

XXYLT1 ENSBTAG00000014564 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000019358, Cow)

Protein Percentage 75.38%
cDNA percentage 76.88%
Ka/Ks Ratio 0.21085 (Ka = 0.1973, Ks = 0.9357)

XXYLT1  (Minke Whale)

Gene Details

xyloside xylosyltransferase 1

External Links

Gene match (Identifier: BACU003794, Minke Whale)

Protein Percentage 20.1%
cDNA percentage 38.19%
Ka/Ks Ratio 0.1029 (Ka = 1.1271, Ks = 10.9534)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 600 bp    Location:427994..426220   Strand:-
>bmy_16523
ATGCATCGGGGTGGCCCACCCCGGGTCAAGCCTCTGGTTTTCTTTCCCCTGCGCCATCCACTGCAGTGCACAGCTCCTCCCTGTCGTTGGTCTGGAAGCTGCTCTGTGGGAGGCCAGAGGGTGGCATTTCCAGGCCGGGGGCAGAGCTGCTTTTGCTATGCTGCATCCCCCACCCTACGGACTCTAGGGAAGAGGGGAAGCTGGCACACATTCTGGCAGTTCCGTCATGAGAACCCCAAAACCCGGGTCGGGGGCCCTCCCCCTGAGGGGCTCCCCGGCTTCAACAGTGGGGTGATGCTGCTCAACCTGGAGGCCATGCGCCAGTCCCCACTGTACGGCCGCCTGCTGGAGCCGGCACAGGTGCAGCAGCTGGCCGACAAGTACCACTTCCGGGGTCACCTCGGGGACCAGGACTTCTTCACCATGATCGGCATGGAGCACCCTGAGCTCTTCCACGTGCTGGACTGTACCTGGAACCGGCAGCTTTGCACCTGGTGGAGGGACCATGGCTACAGCGACGTCTTCGATGCCTACTTCCGGTGTGAGGGCCACGTCAAGATCTACCACGGGAACTGCAACACCCCTATCCCAGAGGCCTAG

Related Sequences

bmy_16523T0 Protein

Length: 200 aa      View alignments
>bmy_16523T0
MHRGGPPRVKPLVFFPLRHPLQCTAPPCRWSGSCSVGGQRVAFPGRGQSCFCYAASPTLRTLGKRGSWHTFWQFRHENPKTRVGGPPPEGLPGFNSGVMLLNLEAMRQSPLYGRLLEPAQVQQLADKYHFRGHLGDQDFFTMIGMEHPELFHVLDCTWNRQLCTWWRDHGYSDVFDAYFRCEGHVKIYHGNCNTPIPEA*