Part of scaffold_1401 (SequenceType object (1))

For more information consult the page for scaffold_1401 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MS4A1ENSTTRG00000000007 (Bottlenosed dolphin)

Gene Details

membrane-spanning 4-domains, subfamily A, member 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000000007, Bottlenosed dolphin)

Protein Percentage 96.88%
cDNA percentage 96.43%
Ka/Ks Ratio 0.20539 (Ka = 0.0178, Ks = 0.0867)

BT.53744ENSBTAG00000004580 (Cow)

Gene Details

B-lymphocyte antigen CD20

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000006236, Cow)

Protein Percentage 82.67%
cDNA percentage 84.74%
Ka/Ks Ratio 0.33215 (Ka = 0.1208, Ks = 0.3638)

MS4A1 (Minke Whale)

Gene Details

membrane-spanning 4-domains, subfamily A, member 1

External Links

Gene match (Identifier: BACU005417, Minke Whale)

Protein Percentage 89.53%
cDNA percentage 89.34%
Ka/Ks Ratio 0.30559 (Ka = 0.0775, Ks = 0.2536)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 819 bp    Location:18840..24942   Strand:+
>bmy_16533
ATGACGACACCCAGAAATTCCATGAGTGGAGCTTTCCCAGCAGGCCCTATTGCCATGCAGCCTGTTCAGAAACTAATTCCCAGGAGGGTGCCTACAGTGGTGGGCGCCACACAGAGCTTCTTCATGAGGGAATCTAAGGCTTTGGGGCCCCATCCAGGTCAGGAACCACGGCTTCCGGCCTCACCTTTGCTTTCTCACTTGAAGATGACTTCAATTCATCCATCAGTGCCCCTATTCTCTCCCCAGGCTGTCCAGATTATGAATGGGCTCTTCCACATTGCCCTGGGTGGCCTCCTGTTGATCCACGCGGAGGTCTATGCACCCATCTGTGTAACTTTGTGGTACCCTCTCTGGGGAGGCATTATGGTCAGAGGGAGAATAATAATGAACTCATTGAGCCTCTTTGCTGCTATTTCTGGAATAATTTTTTTGATCATGGACATATTTAATCTGACAGGCATTTTTGCAGTGATGCTGCTCTTTGCCTTCCTCCAAAAACTTGTGACAGCTGGCACTGTTGAGAATGAATGGAAAAAAATATGCTCCAGACCCAAAGCTAATGTAGTTCTCCTGTCAGCAGAAGAAAAAAAGGAACAGGCAATTGAAATAAAAGAAGAAGTGGTTGAGCAGATTGAAATATCTTCCCAACCAAAGAAYGAAGAGGACATTGAAATTATTCCAGTCCAAGAAGAAGAAGAAGAAGAAGAAGAAACAGAAATAAACTTTCCAGAACCTCCCCAAGATCAGGAAGCCTCACCAATAGAAAATGATAGTACATTAACGTTCACAGCTTCCAAGAGACTTATTTACCCCCATTTC

Related Sequences

bmy_16533T0 SequenceType object (3)

Length: 273 aa      View alignments
>bmy_16533T0
MTTPRNSMSGAFPAGPIAMQPVQKLIPRRVPTVVGATQSFFMRESKALGPHPGQEPRLPASPLLSHLKMTSIHPSVPLFSPQAVQIMNGLFHIALGGLLLIHAEVYAPICVTLWYPLWGGIMVRGRIIMNSLSLFAAISGIIFLIMDIFNLTGIFAVMLLFAFLQKLVTAGTVENEWKKICSRPKANVVLLSAEEKKEQAIEIKEEVVEQIEISSQPKNEEDIEIIPVQEEEEEEEETEINFPEPPQDQEASPIENDSTLTFTASKRLIYPHF