Sequence detailsbmy_16539 (Coding sequence)

Part of scaffold_1401 (SequenceType object (1))

For more information consult the page for scaffold_1401 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PTGDR2ENSTTRG00000012434 (Bottlenosed dolphin)

Gene Details

prostaglandin D2 receptor 2

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000011782, Bottlenosed dolphin)

Protein Percentage 92.11%
cDNA percentage 93.89%
Ka/Ks Ratio 0.10098 (Ka = 0.0227, Ks = 0.2249)

GPR44ENSBTAG00000039652 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000052511, Cow)

Protein Percentage 86.85%
cDNA percentage 91.48%
Ka/Ks Ratio 0.14174 (Ka = 0.058, Ks = 0.4094)

PTGDR2 (Minke Whale)

Gene Details

prostaglandin D2 receptor 2

External Links

Gene match (Identifier: BACU005414, Minke Whale)

Protein Percentage 95.86%
cDNA percentage 95.24%
Ka/Ks Ratio 0.1078 (Ka = 0.0245, Ks = 0.2277)

Additional orthologs identified in other species via the OPTIC pipeline.

PTGDR2 (Human)   Gpr44 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1212 bp    Location:277690..276479   Strand:-
Raw sequence 
>bmy_16539
ATGTCAGCCAACGTCACGATGAAGCCCCTGTGTCCCCTCCTGGAGCAGATGAGCCGCCTCCAAAGCCACAGCAACTCCAGCATCCGCTACATTGACCACGCGTCAGTGCTGCTGCATGGGCTGGCCTCGCTGCTGGGCCTGGTGGAGAACGGACTGATCCTCTTCGTGGTGGGCTGCTGCATGCGCCAGACCGTGGTCACCACCTGGGTGCTGCACCTGGCACTGTCTGACCTGCTGGCCACTGCCTCCCTGCCTTTCTTCACCTACTTCCTGGCCGTGGGCCACTCCTGGGAGCTGGGCACCGCCTTCTGCAAGCTGCACTCCTCCATCTTCTTCCTCAACATGTTCGCCAGCGGCTTCCTGCTCAGCGCCATCAGTCTGGACCGCTGCCTGCAGGTGGTGCGGCCCGTGTGGGCGCAGAACCACCGCACGGTGGCCGTGGCCCACAGGGTATGCCTGGCGCTCTGGGCCCTGGCCGTGCTCAACACCGTGCCCTACTTCATCTTCCGGGACACCATCCCGCGGGTGGACGGGCGCATCATGTGCTACTACAACGTGCTGCTCCTGAACCCCGGGCCCGACCGCGATGCCACGTGCAACTCGCGCCAGACGGCCCTGGCCGTCAGCAAGTTCCTGCTGGCCTTCGCCGTGCCGCTGGCCATCATCGCCTCGAGCCACGCGGCCGTGAGCGTGCATTTGCGCCACCGCGGCCGCCGGCGGCCCGGCCGCTTCGTGCGCCTGGTGGCGGCCGTGGTGGCGGCCTTCGCGCTCTGCTGGGGGCCCTACCACGTGTTCAGCGTGCTGGAGGCGCGGGCGCACGCGGACCCGGCGCTGCGGCCGCTCGTGTGGCGCGGGCTGCCGTTCGTCACCAGCCTGGCCTTCGTCAACGGCGTGGTCAACCCGCTACTCTACGTGTTCACCTGCCCCGACGTGCTGCGCAAGCTGCGGCGCTCGCTGCGGAGCGTGCTGGAGAGCGTGCTGGTGGACGACAGCGAGCTGGGCGGCGGGGGCAGCAGCCGCCGCCGCCGCCGCACGTCCTCCACCTCGGCCTCCTCCTTCTCGCTGGGCGGCCGCAGCCTGCCCCCGCTCGGGCCCGCAGGCCTGCTCGGCTGGCTGCGGGGTGGCCGCGCGGCGTCCCCGCAGAGGGACCGGGCTCGATCCCAGCACGAGCGGGGCCCCCTGAACCGGGCGCTGCGCACCACCTCGGCGTAG

Related Sequences

bmy_16539T0 SequenceType object (3)

Length: 404 aa      View alignments
>bmy_16539T0
MSANVTMKPLCPLLEQMSRLQSHSNSSIRYIDHASVLLHGLASLLGLVENGLILFVVGCCMRQTVVTTWVLHLALSDLLATASLPFFTYFLAVGHSWELGTAFCKLHSSIFFLNMFASGFLLSAISLDRCLQVVRPVWAQNHRTVAVAHRVCLALWALAVLNTVPYFIFRDTIPRVDGRIMCYYNVLLLNPGPDRDATCNSRQTALAVSKFLLAFAVPLAIIASSHAAVSVHLRHRGRRRPGRFVRLVAAVVAAFALCWGPYHVFSVLEARAHADPALRPLVWRGLPFVTSLAFVNGVVNPLLYVFTCPDVLRKLRRSLRSVLESVLVDDSELGGGGSSRRRRRTSSTSASSFSLGGRSLPPLGPAGLLGWLRGGRAASPQRDRARSQHERGPLNRALRTTSA*