Part of scaffold_1401 (Scaffold)

For more information consult the page for scaffold_1401 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CD6 ENSTTRG00000012501 (Bottlenosed dolphin)

Gene Details

CD6 molecule

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011862, Bottlenosed dolphin)

Protein Percentage 87.6%
cDNA percentage 89.23%
Ka/Ks Ratio 0.27437 (Ka = 0.0256, Ks = 0.0935)

CD6 ENSBTAG00000018367 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000044264, Cow)

Protein Percentage 82.49%
cDNA percentage 88.73%
Ka/Ks Ratio 0.33598 (Ka = 0.0918, Ks = 0.2733)

CD6  (Minke Whale)

Gene Details

CD6 molecule

External Links

Gene match (Identifier: BACU005409, Minke Whale)

Protein Percentage 97.79%
cDNA percentage 98.73%
Ka/Ks Ratio 0.35449 (Ka = 0.0095, Ks = 0.0267)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1494 bp    Location:408632..420472   Strand:+
>bmy_16546
ATGAACGGGAGCAGCCGCTGCAACGGGACGGTGGAGGTCTGGTTCCGGCAGTCCTGGGAGCCCGCATGCGGGGCACTCTGGGACCTCCGCGCCTCCGAGGCCGTGTGCCGCTCGCTGGGTTGCGGCCGGGCGGAGCCGCGGGAACAGCCCGTCCTGCCGACCCCGGCGCTGCCGCCTGGTGCAGCCGCGGGAAACGCCAGCTGGGCCCCGAATACCACGTGGGCCCTGGCGCCCACCGTCCAGTGCAGCGGCCCCGAATGGCAGCTCTGCAAGGTGGTGGAGCACGCGTGCAGCAGCGACGAGAGGCTGGTCCAGGTCACCTGTGCAGAAAACCTCGATTTGAAATTGGTGGGTGGTGGCAGCCCGTGCGAGGGCCGCGTGGAGATGCTGGAGCACGGACAGTGGGGTTCGGTGTGTGACGACACGTGGGACCTGGACGATGCCCACGTGGTGTGCCGGCAACTGAGCTGCGGCTGGGCAGTCCAGGCCCTGCCCGGCTTGCACTTTGCCCCTGGCCATGGACGCATCCACCGGGACCAACACCAGTCCTGGCGCCTGACCGGGGGCGCTGACCCCTGCGAGGGGCAGGTGGAGGTATACTTCCGAGGGGTCTGGAACACAGTGTGTGACAGTACGTGGTACGAACCAGAGGCCAAGGTGCTCTGCCGGGACTTGGGCTGTGGGACTCTGGCCCGGGTGCCCAAGGGGCTGCCACACTCCCTGTCGGGCAAGATGTACTACTCATGCGAGGGAGGGGAGCCCACGCTCTCCGAGTGCTTCTGGCGGTTCAATAACTCCAACCTCTGCAGCCAATCACAGGCAGCCAGGGTCCTCTGCTCAGAATCTTCTGTGATGGTGAAAATGAAGGACTGGGAATCTCGAGAGCTAATGCTCCTCATCCCTTGCATCGTTCTGGGAATTCTCCTTCTTGTCTCACTCAGTTTCATAGCCATCATCCTCTTGAGAATTAAAGGAAAATACGCCCTCCCCGCTATGGTGAACCACCAGCACCTACCCACCACCACCCCAGCGGGGACCACAAGCTATCAAGAGGTTCCCATCACCATCGCCAAAGAAGAAATTCCCAAGCTGCCCATCCAGGTCCAGGCTCCGCCCCCTGAAGACTCGAACTCCAGCTCCGACTCAGACTATGAGCACTATGACTTCAGCAGCCAGCCTCCTGTGGCCCTGACCACCTTCTACAATTCCCAACGGCACCGCTTCACAGATGAAGAGGTCCAGCAGAACAGGTTCCAGATGCCCCCCTTGGAGGAAGACCCCCACTCCACGGGCCCTCAGCACCACCCAAGGAGCAAGAGTGGCTCCAGCACATCTTCAGGGGAGGAGTACTGTAACAGCCCCAGCAGCAGGCTACCTCCGTGGAACTCTCAAGTGTTTTCTTCAGAGAGGAACCCCCCGCTGGGGCAGCCCCTGAACTTGGAGCTGGCTGGCTCCCAGGCAGCTTTTCCAGACTATGATGACATTGGAGCAGCC

Related Sequences

bmy_16546T0 Protein

Length: 498 aa      View alignments
>bmy_16546T0
MNGSSRCNGTVEVWFRQSWEPACGALWDLRASEAVCRSLGCGRAEPREQPVLPTPALPPGAAAGNASWAPNTTWALAPTVQCSGPEWQLCKVVEHACSSDERLVQVTCAENLDLKLVGGGSPCEGRVEMLEHGQWGSVCDDTWDLDDAHVVCRQLSCGWAVQALPGLHFAPGHGRIHRDQHQSWRLTGGADPCEGQVEVYFRGVWNTVCDSTWYEPEAKVLCRDLGCGTLARVPKGLPHSLSGKMYYSCEGGEPTLSECFWRFNNSNLCSQSQAARVLCSESSVMVKMKDWESRELMLLIPCIVLGILLLVSLSFIAIILLRIKGKYALPAMVNHQHLPTTTPAGTTSYQEVPITIAKEEIPKLPIQVQAPPPEDSNSSSDSDYEHYDFSSQPPVALTTFYNSQRHRFTDEEVQQNRFQMPPLEEDPHSTGPQHHPRSKSGSSTSSGEEYCNSPSSRLPPWNSQVFSSERNPPLGQPLNLELAGSQAAFPDYDDIGAA