Part of scaffold_1401 (Scaffold)

For more information consult the page for scaffold_1401 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CD5 ENSTTRG00000000042 (Bottlenosed dolphin)

Gene Details

CD5 molecule

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000037, Bottlenosed dolphin)

Protein Percentage 89.79%
cDNA percentage 92.91%
Ka/Ks Ratio 0.36538 (Ka = 0.0504, Ks = 0.138)

CD5 ENSBTAG00000013730 (Cow)

Gene Details

T-cell surface glycoprotein CD5

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000018258, Cow)

Protein Percentage 74.0%
cDNA percentage 82.8%
Ka/Ks Ratio 0.35424 (Ka = 0.1532, Ks = 0.4326)

CD5  (Minke Whale)

Gene Details

CD5 molecule

External Links

Gene match (Identifier: BACU005407, Minke Whale)

Protein Percentage 93.7%
cDNA percentage 95.66%
Ka/Ks Ratio 0.33366 (Ka = 0.0326, Ks = 0.0977)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1452 bp    Location:502494..512091   Strand:+
>bmy_16547
ACTTCCTGCCTCAGAGGCCTCAGAGGGCTCAACTTAGAGGACAAAGGGTTCACAGTGAGACTAAGCGGCTCCGGCTCGCGGTGCCAGGGCCATCTGGAGGTCAACTACAAGGACGAGTGGTACACGGTGAACAGCCAGAGCTGGGGCCTGCGCCCGTTCCACCGGGAGGACCCCGGTCAGGCCTGGAAGCTCTGCCAGAAGCTGCGATGCAGGGAGCCCTTGCTCCTCTCCCACTTCCGTCACTTCAAAGGGAAGCGACCCCAGAGCCAGATCACCTGCCGCGGACAACTGGGGTCCTTCTCCAACTGCAGCAACAGCAAGGCAAACCAGGGGGACCCTCTGGCCCTGATCTGCTTAGAGCAAGAAAGAGCCTGCTGCTGGTCATCAGCACTCAGGTCCCTCCCCACCTCCCCAGCTCCTCCCAGGCTGCAGCTGGTGGCGCAACCTGGGGGCCTGCGGTGTGCAGGCCTGGTGGAGTTCTACAGCGGCAGCCTGGGTGGCACCGTCGGCATCGAGTCCCAGGACGGGATCCAGGACCTGGGGAACCTCATCTGTGCAGCCGTCCAGTGTGGCTCTTTCCTGAAGCCTCTGCCAGAGACCGAGGCAGCCAGGACACTAGAGCCAGGAGAGAGCAGTCCCTTGCCAATCCGGTGGAAGATCCAGAACAGAAGATGTGCCTCCGTAGAGCAGTGCTTCAGAAAAGTTCAGCCCCAGGAGGGAGGCCAAGCTCTCGGCCTCATCTGTTCTGATTTCCAGCCCAAGGTGCAGAGCCGCCTGGTGGGGGGCAGCGGCACGTGTGAAGGCTCCGTGGAGGTGCGCCAGGGCAAGCAGTGGGACGCCCTGTGCGATAGCTCCTCAGCCAAGGGCGTGGCGAGGTGGGAGGACGTGTGCCAGGAGCAGCAGTGCGGCAACGTCAGCTCCTACCAGCTGCTGGACACCGGCGAGAAGACCTCCGGGGGGTTCTTCTGTCCCCCGGGGAAGCTGTCCCAGTGCCACCAGCTTCTGCAGAAAAAATCCCACTGCAAGAGAGTGTTTGTCACCTGTGAGTTGGGCCCAGCCCATGGCCAGAACTCAAGCCCAGCGGGCCTGGGTGCGGGTACAGTGACGAGCATCATCCTGGCCCTCGTTCTCGCGGTAGTGCTGCTGGTCGTGTGTGGCCCCCTCGCCTACAAGAAGCTGSTGAAGAAATTCCGCCAGAAGAAGCAGCGCCAGTGGATTGGCCCGACGGGAATGAACCAGAACATGTCTTTCCATCGCAACCACACGGTGACTGTCCGGTCCCAGGCTGAGAACCCCACGGCCTCCCACCTGGAGAACGAATACAGTCAGCCTCCCAGGAACTCCCAAATCTCAGCTTTTCCAGCTCTGGAAGGGGCCCTGCATCGCGTCTCCACCCAGCCCGATAACTCCTCTGACAGTGACTATGATCTGCACGGGGCTCAGAGGCTGTAA

Related Sequences

bmy_16547T0 Protein

Length: 484 aa      View alignments
>bmy_16547T0
TSCLRGLRGLNLEDKGFTVRLSGSGSRCQGHLEVNYKDEWYTVNSQSWGLRPFHREDPGQAWKLCQKLRCREPLLLSHFRHFKGKRPQSQITCRGQLGSFSNCSNSKANQGDPLALICLEQERACCWSSALRSLPTSPAPPRLQLVAQPGGLRCAGLVEFYSGSLGGTVGIESQDGIQDLGNLICAAVQCGSFLKPLPETEAARTLEPGESSPLPIRWKIQNRRCASVEQCFRKVQPQEGGQALGLICSDFQPKVQSRLVGGSGTCEGSVEVRQGKQWDALCDSSSAKGVARWEDVCQEQQCGNVSSYQLLDTGEKTSGGFFCPPGKLSQCHQLLQKKSHCKRVFVTCELGPAHGQNSSPAGLGAGTVTSIILALVLAVVLLVVCGPLAYKKLXKKFRQKKQRQWIGPTGMNQNMSFHRNHTVTVRSQAENPTASHLENEYSQPPRNSQISAFPALEGALHRVSTQPDNSSDSDYDLHGAQRL*