Part of scaffold_1356 (Scaffold)

For more information consult the page for scaffold_1356 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NUDCD1 ENSTTRG00000001736 (Bottlenosed dolphin)

Gene Details

NudC domain containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001641, Bottlenosed dolphin)

Protein Percentage 63.88%
cDNA percentage 71.14%
Ka/Ks Ratio 0.5906 (Ka = 0.2743, Ks = 0.4645)

BT.35837 ENSBTAG00000007386 (Cow)

Gene Details

nudC domain-containing protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009711, Cow)

Protein Percentage 65.37%
cDNA percentage 72.84%
Ka/Ks Ratio 0.44146 (Ka = 0.291, Ks = 0.6592)

NUDCD1  (Minke Whale)

Gene Details

NudC domain containing 1

External Links

Gene match (Identifier: BACU014928, Minke Whale)

Protein Percentage 84.34%
cDNA percentage 88.97%
Ka/Ks Ratio 0.52108 (Ka = 0.1048, Ks = 0.2011)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1017 bp    Location:222532..231363   Strand:+
>bmy_16581
ATGGAGAATTTCACATCGAAGAGGAGAGCACTCTTTCTGCAAAAACAGAATACGACGGCAAATTTTTTCAACGAGTTGAGGAAAAAACGCCAAGAGACAATTTTAGAAATGTTTAAAGACAAGAGCAAGCTCTCCAAAATTGTCATTAGAGTCAACCTGGGTGGAACACCAATGTACAGGAGACAGGGATGGGAACCACGCCGCCTCCCAGCCACGGTGATACGCGTGAAGCGCGGACCTTTCAACACGAACTTTATTAATTCTCACGTTAGGACCCTGGAAGGCGATGGAGATGGAACTGGAAGATTGTATCTCATTGGAACAGGTGAATGTGGAAATAGTGCTTCTGAAAAATGGGAGATTATGTTTAATGAAGAGCTTGGGAGTCCTTTTATCATAATTCACATTATCTCGTTGCTGAAAGCTGAAGAACATTCGATAACTATGCTGCTTCTTCGAACAGAGAAAGAGGAATTGGTTATGGAAGGAAGTGGTTTCTATGTTTCCTTGGAGTGGGTCACTATTAATAAGAAAAATAAAGATAATAAAAAATATGAAATTACTAAGCATAATATTCTCCGTGGAAAGTCAGTGCCCCCTTATGTCGCTTTTGAGCCCGATGGGAATGGTCTAATGATTGTCTCAATTGGTCAAGATCTTGAAGAAAGTAAAGATGAAGACATGTCAGAGAAAATCAAAGAACCTCTGTATTACTGGCAACAGACTGAAGATGATTTGACAGTAACAATACCACTTCCAGAAGACTGTACTAAGGAAGACATTCAAATACAGTTTTTGCCTGATCATGTCAACGTTGTGCTGAAGGGTCAGAGGTTTCTGGAAGGAAATCTCTATTCATCTATGGATCATGAAAGCAGTATATGGATAATTAAAGAGAATAATAGCTTGGAGATTTCCTTGATTAAGAAGAATGAAGGACTGACATGGCCAGAACTAGTGGTCGGTGATAAACGGGGAATTTATAAGAGACTCAGCTCAATGTGCTGCCATAGCTGA

Related Sequences

bmy_16581T0 Protein

Length: 339 aa      View alignments
>bmy_16581T0
MENFTSKRRALFLQKQNTTANFFNELRKKRQETILEMFKDKSKLSKIVIRVNLGGTPMYRRQGWEPRRLPATVIRVKRGPFNTNFINSHVRTLEGDGDGTGRLYLIGTGECGNSASEKWEIMFNEELGSPFIIIHIISLLKAEEHSITMLLLRTEKEELVMEGSGFYVSLEWVTINKKNKDNKKYEITKHNILRGKSVPPYVAFEPDGNGLMIVSIGQDLEESKDEDMSEKIKEPLYYWQQTEDDLTVTIPLPEDCTKEDIQIQFLPDHVNVVLKGQRFLEGNLYSSMDHESSIWIIKENNSLEISLIKKNEGLTWPELVVGDKRGIYKRLSSMCCHS*