Sequence detailsbmy_16590 (Coding sequence)

Part of scaffold_1340 (SequenceType object (1))

For more information consult the page for scaffold_1340 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DEPDC7ENSTTRG00000016357 (Bottlenosed dolphin)

Gene Details

DEP domain containing 7

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000015503, Bottlenosed dolphin)

Protein Percentage 97.23%
cDNA percentage 98.42%
Ka/Ks Ratio 0.45232 (Ka = 0.0118, Ks = 0.0261)

DEPDC7ENSBTAG00000021809 (Cow)

Gene Details

DEP domain-containing protein 7

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000029070, Cow)

Protein Percentage 93.48%
cDNA percentage 94.33%
Ka/Ks Ratio 0.20312 (Ka = 0.0307, Ks = 0.1513)

Additional orthologs identified in other species via the OPTIC pipeline.

DEPDC7 (Human)   Depdc7 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1521 bp    Location:339700..321863   Strand:-
Raw sequence 
>bmy_16590
ATGGCCACGGTGCGGGAGAAGGCGGCGGCGCTCAACCTGTCGGCTCTCCAGAGTCCCGCGCAGAGGCCTCCCGGTTTCAGTGTAGCCCAGAAGCCGTTTGGAGCCACATATGTATGGAGCAGCATTATAAACACTCTTCAAACACAAGTGGAGGTGAAAAAACGAAGGCATCATTTAAAAAGACACAATGACTGTTTTGTTGGTTCGGAAGCTGTGGATGTCATTTTTTCTCACCTAATTCAGAATAAATACTTTGGTGATGTAGATATTCCTCGGGCCAAAGTGGTGAGAGTGTGTCAAGCACTTATGGACTACAAAGTATTTGAAGCAGTTCCGACCAAAGTCTTTGGAAAAGACAAAAAACCTACATTTGAAGATAGTAGTTGCAGTCTTTATAGATTCACAACGATACCTAACCAAGACAGTCAATTAGGCAAAGAGAACAAACTGTATGCAGATGCATTATTTAAGTCCTCCGATATCAAATCTGCAAGTTTAGAGGATCTGTGGGAAAATCTGAGTTTAAAGCCTGCTGACTCCCCTCACGTAAATATCTCTGCAAACTTGTCTCCACAAGTTATTCATGAAGTATGGCAAGAAGAAACAGTTGGGCGTCTGCTACAACTTATAGACCTTCCACTCCTTGACTCCCTCCTCAAACGGCAAGAGGTGGTACCTAAAGTTACTCAACCAAAGAGGCAGCCTGACTTGGTCAACAACAGGAACTATCTGGATCGAGGGATTCTCAAGGCTTACGGTGAATCTCAGGAAGATGAGTGGCTTTCTTCAGCAATTGACTGCTTGGAATACCTTCCAGACCAGATGGTTGTAGACATAAGCAGAAACTTTCCTGAGCAACCAGATAGAATAGACTTAGTGAAAGAACTTCTATTTGATGCCATTAGCAAATATTACAGTAGTAGGGAACCTCTGTTAAATCACCTATCTGATGTTCATAATGGAATTGCAGAACTCCTAGTGAATGGGAAGACTGAAATAGCATTAGAAGCTACTCAGCTCTTTCTAAAGCTTTTGGATTCCCAAAATAGAGAAGAATTTAGAAGACTACTGTATTTCATGGCTGTTGCAGCACATCCTTCTGAATTTAAATTACAGAAAGAAAGTGACAACCGAATGGTTGTGAAAAGGATATTCTCAAAAGCTATTGTTGACAATAAAAATTTATCCAAAGGCAAAACTGATCTTCTGGTACTCTTTTTAATGGATCATCAAAAAGATGTTTTTAAGATTCCTGGAACTCTACATAAAATTGTCAGTGTTAAGCTCATGGACATTCAGAAGGGAAGAGATCCAAACAGAGACACAGGATATATTTATTGCCAGAGAATTGATCAAAGTGATTATTCTGACCATACAAGGAAGACAACCAAGGATGAGCTAATGAGTTTACTAAAAAATATTGATGAGGATTCAAAACTTTCTGCCAAAGAGAAGAAAAAATTGCTAGCTYAGTTCTATAAGTGTCACCCAGACATCTTTATTGAGTATTTTGGGGACTGA

Related Sequences

bmy_16590T0 SequenceType object (3)

Length: 507 aa      View alignments
>bmy_16590T0
MATVREKAAALNLSALQSPAQRPPGFSVAQKPFGATYVWSSIINTLQTQVEVKKRRHHLKRHNDCFVGSEAVDVIFSHLIQNKYFGDVDIPRAKVVRVCQALMDYKVFEAVPTKVFGKDKKPTFEDSSCSLYRFTTIPNQDSQLGKENKLYADALFKSSDIKSASLEDLWENLSLKPADSPHVNISANLSPQVIHEVWQEETVGRLLQLIDLPLLDSLLKRQEVVPKVTQPKRQPDLVNNRNYLDRGILKAYGESQEDEWLSSAIDCLEYLPDQMVVDISRNFPEQPDRIDLVKELLFDAISKYYSSREPLLNHLSDVHNGIAELLVNGKTEIALEATQLFLKLLDSQNREEFRRLLYFMAVAAHPSEFKLQKESDNRMVVKRIFSKAIVDNKNLSKGKTDLLVLFLMDHQKDVFKIPGTLHKIVSVKLMDIQKGRDPNRDTGYIYCQRIDQSDYSDHTRKTTKDELMSLLKNIDEDSKLSAKEKKKLLAXFYKCHPDIFIEYFGD*