Sequence details bmy_16607 (Coding sequence)

Part of scaffold_1342 (Scaffold)

For more information consult the page for scaffold_1342 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SCRN1 ENSTTRG00000013677 (Bottlenosed dolphin)

Gene Details

secernin 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012975, Bottlenosed dolphin)

Protein Percentage 86.71%
cDNA percentage 89.29%
Ka/Ks Ratio 0.52348 (Ka = 0.0981, Ks = 0.1875)

SCRN1 ENSBTAG00000016223 (Cow)

Gene Details

Secernin-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000021588, Cow)

Protein Percentage 85.44%
cDNA percentage 86.65%
Ka/Ks Ratio 0.31276 (Ka = 0.1015, Ks = 0.3244)

SCRN1  (Minke Whale)

Gene Details

secernin 1

External Links

Gene match (Identifier: BACU015700, Minke Whale)

Protein Percentage 87.92%
cDNA percentage 90.18%
Ka/Ks Ratio 0.52913 (Ka = 0.0905, Ks = 0.171)

Additional orthologs identified in other species via the OPTIC pipeline.

SCRN1 (Human)   Scrn1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1278 bp    Location:110091..74953   Strand:-
Raw sequence 
>bmy_16607
ATGGCTTTAGCTCCTCCAAGTTACTGTTTTGTGGCCTTCCCACCACGTGCGAAGGACGGTCTGGTGGTATTTGGGAAAAATTCAGCTCGGCCCAGGGATGAAGTGCAAGAGATTGTGTATTTCTCGGCAGCTGATCATGAACCTGAGAGCAAGGCTGAGTGCACTTACATTTCAATCGACCAAGTTCCCAGGACCCATGCCATCGTGATAAGCAGACCTGCCTGGCTTTGGGGGGCAGAAATGGGAGCCAATGAACATGGAGTGTGCATAGCCAATGAAGCCATCAATGCCAGAGAACCAGCCGCTGAAACGGAAGCCTTACTGGGGATGGATCTGGTCAGGCTTGGTTTAGAGAGAGGGGCAACAGCTAAAGAAGCCTTAGATGTCATCGTCGCCTTGTTGGAAGAACATGGACAAGGCGGGAATTATTATGAAGATGCAAACTCCTACCACAGCTTCCAAAGTGCATATCTGATCGTGGACAGTGGGGAAGCCTGGGTGCTGGAGACCGTGGGGAAGTACTGGGCTGCGGAGAGAATCACAGAGGGAGTCAAGTGCATTTGCAATCAGCTTTCGCTCATGACCAAGATCGACGCAGAGCATCCTGAACTCAGGAGTTACGCTCAGAGTCAAGGCTGGTGGACGGGAGAGGACGAGTTCAATTTTTCTGAAGTTTTTTCTCCAGCTGATGACCATCTAGCCTGCTGTTCAGGCAAAGACAGCTTAGAAAAGCAAGAAGTTCTGAACGCTTGGTTCCATGGCCCCACTCCCACCCCCTTTTTGATCCATCAGATCTGGGGCTTGTCTTTCCTCTTCCTGGTGTCTGACTTCCCCTTGTGGACTCTGACCTCGCTTGCTGGTGGCTTTTGTGAGCACTTTGTGCTGGTCCGCAGGGGTACATGTAGGCATTTAGAGTCTGTCTGGAACACTCTGCCAAGGTCCATATTCAAGCCTTTCATCTTTGTCGACGATGTAAAACTCGTCCCCAAAGCACAGTCTCCCTCTTTCGGAGACGATGACCCTGCCAAAAAGGAGCCTCGGTTCCAGGAGAAGCCAGACCGCCGCCACGAGCTGTATAAGGCCCACGAGTGGGCCCGGGCGGTGCTGGAGAGTGACGAGGAGCAAGGTCAAAAGCTGAGGAAGACAATGCTGGAACTAGAGAAGCAAGGCCTGGAAGCCATGGAGGAAATCCTGACCAGCAATGACCCCCTGGACCCCACCGAAGTGGGAGATCTCTTCTATGACTGTGTTGACACGGAGATTAAGTTCTTTAAGTGA

Related Sequences

bmy_16607T0 Protein

Length: 426 aa      View alignments
>bmy_16607T0
MALAPPSYCFVAFPPRAKDGLVVFGKNSARPRDEVQEIVYFSAADHEPESKAECTYISIDQVPRTHAIVISRPAWLWGAEMGANEHGVCIANEAINAREPAAETEALLGMDLVRLGLERGATAKEALDVIVALLEEHGQGGNYYEDANSYHSFQSAYLIVDSGEAWVLETVGKYWAAERITEGVKCICNQLSLMTKIDAEHPELRSYAQSQGWWTGEDEFNFSEVFSPADDHLACCSGKDSLEKQEVLNAWFHGPTPTPFLIHQIWGLSFLFLVSDFPLWTLTSLAGGFCEHFVLVRRGTCRHLESVWNTLPRSIFKPFIFVDDVKLVPKAQSPSFGDDDPAKKEPRFQEKPDRRHELYKAHEWARAVLESDEEQGQKLRKTMLELEKQGLEAMEEILTSNDPLDPTEVGDLFYDCVDTEIKFFK*