Part of scaffold_1358 (Scaffold)

For more information consult the page for scaffold_1358 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PTPRF ENSTTRG00000002376 (Bottlenosed dolphin)

Gene Details

protein tyrosine phosphatase, receptor type, F

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002229, Bottlenosed dolphin)

Protein Percentage 95.5%
cDNA percentage 95.47%
Ka/Ks Ratio 0.1772 (Ka = 0.0248, Ks = 0.1398)

PTPRF ENSBTAG00000000253 (Cow)

Gene Details

Receptor-type tyrosine-protein phosphatase F

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000024046, Cow)

Protein Percentage 94.35%
cDNA percentage 92.6%
Ka/Ks Ratio 0.07865 (Ka = 0.031, Ks = 0.3947)

PTPRF  (Minke Whale)

Gene Details

protein tyrosine phosphatase, receptor type, F

External Links

Gene match (Identifier: BACU000355, Minke Whale)

Protein Percentage 96.22%
cDNA percentage 96.6%
Ka/Ks Ratio 0.2524 (Ka = 0.024, Ks = 0.0951)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 5586 bp    Location:344044..393832   Strand:+
>bmy_16625
GGCAGGGTGGGCCCCACGGCAGCTCCCTGGCCCTGTGAAGGGCAGGGCTGGGCAGTGGGGCTCGGGACTCTGGTTCCTTATGTCAGGGCAGGCTTCATGCTTAGAAGTCAGGGCAGAGATAAGTCGATCCCAGCCACCCTGGGAGTCTTAGGGCGGTCCTCGTGGGCAGGCAGTGCCAGCCCTAACGTGCACATCTGCTCTTTATCTGCAGAGGAACAGCTGCCCCCCGGCTTCCCCTCCATTGACATGGGACCTCAGCTGAAGGTGGTGGAGAAGGCCCGCACGGCCACCATGCTGTGCGCAGCAGGCGGGAATCCAGACCCTGAGATCTCTTGGTTCAAGGACTTCCTCCCTGTGGACCCCGCCACGAGCAACGGCCGCATCAAGCAGCTGCGTTCAGGTGCCTTGCAGATTGAGAGCAGCGAGGAGTCGGACCAAGGCAAGTACGAGTGTGTGGCGACCAACTCCGCAGGCACACGCTACTCGGCCCCCGCCAACCTGTATGTGCGAGTGCGCCGCGTGGCTCCTCGTTTCTCCATCCCTCCCAGCAGCCAGGAGGTGATGCCGGGCGGCAGCGTGAACCTGACGTGCGTCGCCGTGGGTGCACCCATGCCCTATGTGAAGTGGATGATGGGGGCCGAGGAGCTCACCAAGGAGGATGAGATGCCGGTCGGCCGCAACGTGCTGGAGCTCAGCAACGTGGTGCGCTCCGCCAACTACACCTGTGTGGCCATCTCCTCGCTGGGCATGATTGAGGCCACGGCCCAGGTCACCGTGAAAGCTCTGCCGAAGCCTCCGATTGACCTTGTGGTGACAGAGACAACTGCCACCAGTGTCACCCTGACCTGGGACTCTGGGAACTCAGAGCCCGTGTCCTACTACGGCATCCAGTACCGTCCAGCGGGTGCGGAGGGCCCCTTCCAGGAGGTGGACGGCGTGGCCACCACCCGCTACAGCATCGGCGGCCTCAGCCCGTTCTCGGAGTACGCCTTCCGCGTGCTGGCGGTGAACAGCATCGGGCGCGGGCCCCCCAGCGAGGCGGTGCGGGCGCGCACGGGGGAGCAGGCGCCCTCCAGCCCCCCGCGCCGCGTGCAGGCGCGAATGCTGAGCGCCAGCACCATGCTGGTGNGGCGCGGGCTCCCCAGCGAGGCGGTGCGGGCGCGCACGGGGGAGCAGGCGCCCTCCAGCCCCCCGCGCCGCGTGCAGGCGCGAATGCTGAGCGCCAGCACCATGCTGGTGCAGTGGGAGCCGCCTGAGGAGCCCAACGGCCTGGTGCGGGGCTACCGTGTCTACTACACCCCCGACTCCCGCCGCCCCCTGAGCGCCTGGCACAAACACAACACGGACGCCGGGCTCCTCACCACCGTGGGCAGCCTGCTGCCCGGCATCACCTACAGCCTGCGCGTGCTGGCCTTCACCGCCGTGGGTGACGGCCCCCACAGCCCCACCATCCAGGTCAAGACACAGCAGGGAGTGCCCGCCCAGCCCGCGGACTTCCAGGCCGACGCGGACTCCGACACCAGGATCCAGCTCTCGTGGCTGCTGCCTCCGCAGGAGCGGATCATCAAGTATGAGCTGGTGTACTGGGCGGCGGAGGACGTGGGCCAGCAGCACAAGGTGACCTTCGACCCCACATCCTCCTACACTGTAGAGGACCTGAAGCCCGACACCCTGTACCGCTTCCAGCTGGCTGCCCGCTCCGAGATGGGGGTGGGCGTCTTCACCCCCACCATTGAGGCTCGCACAGCACAATCCACCCCCTCCGCCCCTCCCCAGAAGGTGACGTGCGTGAGCGTGGGCTCCACCACGGTCCGGGTAAGTTGGGTCCCACCGCCAGCCGCCAGCCGCAACGGCGTTATCACCCAGTACTCGGTGGCCTACGAGGCGGTGGACGGCGAGGACCGCGAGCGGCACGTGGTGGACGGCATCGGCCGCGAGCACTCCAGCTGGGACCTGGTGGGCCTGGAGAAGTGGACGGAGTACCAGGTGTGGGTGCGGGCGCACACGGACGTGGGCCCCGGCCCCGAGAGCAGCCCGGTGTTGGTGCGCACCGACGAGGACGTGCCCAGCGGGCCGCCACGGAAGGTGGAGGTGGAGCCGCTGAACTCCACTGCCGTGCGCGTCTCCTGGAAGCTGCCCGTCCCCAGCAAGCAGCACGGTCAGATCCGCGGCTACCAGGTCACCTATGTGCGGCTAGAGAATGGCGAGCCCCGCGGCCCACCCATCATCCAGGACGTCATGCTGGCCGAGGCCCAGGAAACCACCATCAGCAGCCTGACCCCGGAGACCACCTACTCCATTACTGTCGCCGCCTACACCACCAAGGGGGACGGTGCCCGCAGCAAGCCCAAAATTGTCACGACCACAGGAGCAGGCCGGCCCACCATGATGGTCAGCACCACGGCCATGAACACCGCGCTGCTCCAGTGGCACCCACCCAAGGAGCTGCCTGGGGAGCTGCTGGGCTACCGGCTGCAGTACCACCGGGCCGACGAGGCACGGCCCAACACCATCGATTTTGGCAAGGATGACCAGCACTTTACGGTCACTGGCCTGCACAGAGGGGCCACCTACATCTTCCGGCTTGCTGCCAAGAACCGGGCCGGCCCGGGCGAGGAGTTCGAGAAGGAGATCACGACCCCCGAGGATGCTCCCAGTGGTTTCCCCCAAAACCTGCGTGTGATAGGGCTGACCACATCTACCACGGAACTGACCTGGGACCCCCCGGTGCTGGCGGAGAGGAACGGGCGCATCACCAACTATACCGTGGTGTACCGTGACATCAACAGCCAGCAGGAGCTGCAGAACATCACTGCCGACACCCACCTGACGCTCTCCGGCCTCAAGCCAGACACCACTTACGACGTCAAGGTCCGTGCACGCACCAGCAAAGGCGCCGGCCCGCTCAGCCCCAGCATCCAGTCCCGGACCATGCCCATGGAGCAAGTGTTYGCCAAGAACTTCCGTGTGGAGGCTGCAATGAAGACATCTGTGCTGCTCAGCTGGGAGGTCCCTGACTCCTACAAGTCAGCTGTACCCTTCAAGATTCTGTACAACGGGCAGAGTGTGGAGGTGGATGGGCATTCCATGCGGAAGCTGATCGCAGACCTGCAGCCGAACACAGAGTACTCATTCGTGCTGATGAACCGTGGCAGCAGTGCGGGGGGCCTGCAGCATCTCGTGTCCATTCGCACAGCCCCCGACCTCCTGCCTCACAAGCCGCTGCCTGCCTCTGCCTACATAGAGGATGGCCGCTTCACTCTCTCCATGCCCCACGTGCTGGACCCCTCGCTCGTCAGGTGGTTCTACATCATGGTGGTGCCCATTGACCGTGTAGGAGGGAGCATGCTGGCGCCGCGATGGAGCACGCCCGAGGAGCTGGAGCTGGACGAGCTTCTGGAGGCCATCGAGCAGGGCGATGGGGAGCTGCGGCAGCGGCGGCAGGCAGAGCGGCTGAAGCCATATGTGGCCGCTCAGGTGGACGTGCTCCCTGAGACTTTCACCCTGGGGGACAAGAAGAGCTACCGGGGCTTCTACAACCGACCGCTGTCTCCAGACCTGAGCTACCAGTGCTTTGTGCTTGCCTCCCTGAAGGAACCCGTGGACCAGAAGCGCTATGCCTCCAGCCCCTACTCCGATGAGATTGTGGTCCAGGTGACACCAGCCCAGCAGCAGGAGGAACCCGAGATGCTGTGGGTGACGGGCCCCGTCCTGGCAGTCATCCTCATCATCCTCATTGTCATCGCCATTCTCCTGTTCAAGAGGAAAAGGACCCACTCCCCATCGTCCAAGGATGAGCAGTCAATTGGGCTGAAGGACTCCTTGCTGGCCCACTCCTCCGACCCCGTGGAGATGCGGCGGCTCAACTACCAGACCCCAGGTATGCGAGACCACCCACCCATCCCCATCACCGACCTGGCGGACAACATCGAGCGCCTCAAAGCCAACGACGGCCTCAAGTTCTCCCAGGAATACGAGTCAATTGACCCTGGACAGCAGTTCACGTGGGAGAATTCAAACCTGGAGGTGAACAAGCCCAAGAACCGCTACGCCAACGTCATTGCCTACGACCACTCTCGAGTCATCCTTACCTCCATTGATGGTGTCCCGGGGAGTGACTACATCAACGCCAACTACATCGATGGCTACCGCAAGCAGAATGCCTACATTGCCACGCAGGGCCCGCTGCCTGAGACCATGGGCGATTTCTGGAGGATGGTGTGGGAGCAGCGCACAGCCACTGTGGTCATGATGACACGGCTGGAGGAAAAGTCCCGGGTGAAATGCGATCAGTACTGGCCAGCCCGTGGCTCCGAGACCTACGGCCTCATCCAGGTGACCCTGCTGGACACGGTGGAGCTGGCCACCTACACTGTGCGCACCTTTGCGCTCCACAAGAGTGGCTCCAGTGAGAAACGGGAGCTGCGTCAGTTCCAGTTCATGGCCTGGCCAGACCACGGAGTTCCCGAGTACCCGACCCCCATCCTGGCCTTCCTGCGGCGGGTCAAGGCCTGCAACCCGCTGGACGCCGGGCCCATGGTGGTGCATTGCAGTGCGGGCGTGGGCCGCACGGGCTGCTTCATCGTCATCGACGCCATGCTGGAGCGGATGAAGCACGAGAAGACGGTGGACATCTACGGCCACGTGACGTGCATGCGGTCGCAGCGCAACTACATGGTGCAGACCGAGGACCAATACGTGTTCATCCATGAGGCGCTGCTGGAGGCCGCCACGTGTGGACACACGGAGGTGCCCGCTCGCAACCTCTACGCACACATCCAGAAGCTGGGCCAAGTGCCTCCTGGGGAAAGTGTGACTGCCATGGAGCTGGAGTTCAAGTTGCTGGCCAGCTCCAAGGCCCACACATCCCGCTTCATCAGCGCCAACCTGCCCTGCAACAAGTTCAAGAACCGCCTGGTGAACATCATGCCCTACGAACTGACCCGTGTGTGTCTGCAGCCCATCCGCGGTGTGGAGGGCTCCGACTACATCAATGCCAGCTTTCTGGATGGCTATAGCACCGAGGACTTCTGGCGCATGCTGTGGGAGCACAACTCCACCATCATCGTCATGCTGACCAGGCTTCGGGAGATGGGCAGGGAGAAGTGCCACCAGTACTGGCCCGCAGAGCGCTCTGCTCGCTACCAGTACTTTGTCGTTGACCCGATGGCTGAGTACAACATGCCCCAGTATATCCTGCGTGAATTCAAGGTCACAGATGCCAGGGATGGGCAGTCAAGGACGATCCGGCAGTTCCAGTTCACAGACTGGCCAGAGCAGGGCGTGCCCAAGACGGGCGAGGGCTTCATCGACTTCATCGGGCAGGTGCACAAGACCAAGGAGCAGTTCGGGCAGGACGGGCCCATCACGGTGCACTGCAGTGCCGGTGTCGGCCGCACCGGGGTGTTCATCACGCTGAGCATCGTCCTGGAGCGGATGCGCTACGAGGGCGTGGTCGACATGTTCCAGACCGTGAAGACCCTGCGCACACAGCGCCCGGCCATGGTGCAGACAGAGGACCAGTACCAGCTGTGCTACCGCGCGGCCCTGGAGTACCTCGGCAGCTTTGACCACTATGCAACGTAA

Related Sequences

bmy_16625T0 Protein

Length: 1862 aa      View alignments
>bmy_16625T0
GRVGPTAAPWPCEGQGWAVGLGTLVPYVRAGFMLRSQGRDKSIPATLGVLGRSSWAGSASPNVHICSLSAEEQLPPGFPSIDMGPQLKVVEKARTATMLCAAGGNPDPEISWFKDFLPVDPATSNGRIKQLRSGALQIESSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVAPRFSIPPSSQEVMPGGSVNLTCVAVGAPMPYVKWMMGAEELTKEDEMPVGRNVLELSNVVRSANYTCVAISSLGMIEATAQVTVKALPKPPIDLVVTETTATSVTLTWDSGNSEPVSYYGIQYRPAGAEGPFQEVDGVATTRYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQAPSSPPRRVQARMLSASTMLVXRGLPSEAVRARTGEQAPSSPPRRVQARMLSASTMLVQWEPPEEPNGLVRGYRVYYTPDSRRPLSAWHKHNTDAGLLTTVGSLLPGITYSLRVLAFTAVGDGPHSPTIQVKTQQGVPAQPADFQADADSDTRIQLSWLLPPQERIIKYELVYWAAEDVGQQHKVTFDPTSSYTVEDLKPDTLYRFQLAARSEMGVGVFTPTIEARTAQSTPSAPPQKVTCVSVGSTTVRVSWVPPPAASRNGVITQYSVAYEAVDGEDRERHVVDGIGREHSSWDLVGLEKWTEYQVWVRAHTDVGPGPESSPVLVRTDEDVPSGPPRKVEVEPLNSTAVRVSWKLPVPSKQHGQIRGYQVTYVRLENGEPRGPPIIQDVMLAEAQETTISSLTPETTYSITVAAYTTKGDGARSKPKIVTTTGAGRPTMMVSTTAMNTALLQWHPPKELPGELLGYRLQYHRADEARPNTIDFGKDDQHFTVTGLHRGATYIFRLAAKNRAGPGEEFEKEITTPEDAPSGFPQNLRVIGLTTSTTELTWDPPVLAERNGRITNYTVVYRDINSQQELQNITADTHLTLSGLKPDTTYDVKVRARTSKGAGPLSPSIQSRTMPMEQVFAKNFRVEAAMKTSVLLSWEVPDSYKSAVPFKILYNGQSVEVDGHSMRKLIADLQPNTEYSFVLMNRGSSAGGLQHLVSIRTAPDLLPHKPLPASAYIEDGRFTLSMPHVLDPSLVRWFYIMVVPIDRVGGSMLAPRWSTPEELELDELLEAIEQGDGELRQRRQAERLKPYVAAQVDVLPETFTLGDKKSYRGFYNRPLSPDLSYQCFVLASLKEPVDQKRYASSPYSDEIVVQVTPAQQQEEPEMLWVTGPVLAVILIILIVIAILLFKRKRTHSPSSKDEQSIGLKDSLLAHSSDPVEMRRLNYQTPGMRDHPPIPITDLADNIERLKANDGLKFSQEYESIDPGQQFTWENSNLEVNKPKNRYANVIAYDHSRVILTSIDGVPGSDYINANYIDGYRKQNAYIATQGPLPETMGDFWRMVWEQRTATVVMMTRLEEKSRVKCDQYWPARGSETYGLIQVTLLDTVELATYTVRTFALHKSGSSEKRELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPLDAGPMVVHCSAGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYVFIHEALLEAATCGHTEVPARNLYAHIQKLGQVPPGESVTAMELEFKLLASSKAHTSRFISANLPCNKFKNRLVNIMPYELTRVCLQPIRGVEGSDYINASFLDGYSTEDFWRMLWEHNSTIIVMLTRLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDMFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT*