Part of scaffold_1358 (Scaffold)

For more information consult the page for scaffold_1358 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

KDM4A ENSTTRG00000002380 (Bottlenosed dolphin)

Gene Details

lysine (K)-specific demethylase 4A

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002230, Bottlenosed dolphin)

Protein Percentage 90.86%
cDNA percentage 90.23%
Ka/Ks Ratio 0.19506 (Ka = 0.0193, Ks = 0.0988)

KDM4A ENSBTAG00000002078 (Cow)

Gene Details

lysine-specific demethylase 4A

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002687, Cow)

Protein Percentage 94.07%
cDNA percentage 92.17%
Ka/Ks Ratio 0.13146 (Ka = 0.0346, Ks = 0.2629)

KDM4A  (Minke Whale)

Gene Details

lysine (K)-specific demethylase 4A

External Links

Gene match (Identifier: BACU000354, Minke Whale)

Protein Percentage 97.78%
cDNA percentage 97.37%
Ka/Ks Ratio 0.22708 (Ka = 0.0158, Ks = 0.0695)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2703 bp    Location:411690..452281   Strand:+
>bmy_16626
ATGGCTTCTGAATCTGAAACCTTGAATCCCAGTGCTCGGATAATGACCTTTTACCCGACTATGGAGGAGTTCCGGAACTTCAGTCGTTATATTGCCTACATTGAATCCCAAGGAGCTCATCGGGCTGGGCTGGCTAAGGTTGTTCCTCCAAAGGAGTGGAAGCCACGAGCGTCCTATGATGATATTGATGACCTGGTCATTCCTGCCCCGATCCAGCAGCTGGTGACTGGGCAGTCTGGCCTCTTTACTCAGTACAACATACAGAAGAAAGCCATGACTGTTCGAGAGTTCCGCAAGATAGCCAATAGCGATAAATGCTATCTCATTTCCTTTGTGACATTAACCAAATGTACTCCGTCCCGCCTGAGCACGGAAAGCGGCTGGAGCGCCTGGCCAAAGTGCTCCTGCAGAAAGGACATGGTGAAGATCTCCATGGACGTGTTTGTGAGGAAGTTCCAGCCAGAAAGGTACAAACTCTGGAAAGCTGGGAAGGACAGCACTGTAATCGACCACACTCTGCCCACGCCAGAAGCGGCCGAGTTTCTCAAGGAGAGTGAACTGGCCCCGAGAGCCCGGAAGGAGGAGGAGTGCCCGGAGGAGGACGACATGGAGGGGGTTGAGGATGGAGAGGAGGGTGACCTGAAGAGGAGCCTGGCCAAGCACCGTATCGGGACAAAGAGGCACCGAGTTTGTCTTGAAATCCCACAGGAGGTGAGTCAGAGCGAGCTCTTCCCCAGGGAGGAGCTGGGCTCTGGACAGTACGATATGGCGGAGTGCCAGGCCGCCCTTGCTCCTGTGAGGCCCACCCACAGCTCCGTGCGCCAAGTTGAGGACGGTCTCACCTTCCCAGATTATTCCGACTCCACCGAAGTCAAATTTGAAGAGCTTAAAAATGTCAAGCTGGAAGAGGAGGATGAGGAGGAGGAGGAGGAGGAAGAGGAGGAAGATCAGGAAGCGGCTGCCTTGGACCTTTCTGTGAATCCGGTTTCTTTTGGGGGTCGTCTCGTCTTCTCAGGCTCCAAAAAGAAGTCATCTTCCAGCCTGGGCTCTGGTTCTTCACGGGATTCTATTTCTTCCGATTCAGAAACCAGTGAGCCTCTGTCCTGCCGAGCCCAGGGGCAAACGGGAGTCCTCACTGTGCACAGCTACGCCAAAGGGGACGACAGGGTCACCGCAGGAGAGTCATGCACGAGGAAGAAAGGGGGTGCCACCAGGAGCATCAACGAACGGGAGCTGGCCGAGGTTGCGGACGAATACATGTTTTCCCTGGAGGAGAGTAAGAAGTCCAAGGGCCGTCGTCAGCCCTTAAGCAAGCTCCCCCGCCACCACCCGCTCGTGTTGCAGGATTGCGTCAGCGATGATGATGTATCAGAACAGGGGACCCCCGAGGAGGAGGCTGAGGAGACGGAGGCCTGGGCCAAGCCCCTGAGCCAGCTGTGGCAGAACCGACCTCCAAACTTTGAGGCCGAAAAGGAATTCAACGAGGCCATGGCCCAGCAGGCCCCTCATTGCGCCGTCTGCATGATCTTTCAGACTTACCATCAGGTGGAGTTTGGAAGCCTTAGTCAGAACTGTGGCAGTGCTCCAGATTTAGCGCCCCAGAAGCAGAGGACCAAGCCATTGATTCCAGAAATGTGCTTCACCTCGACTGGGTGTAGCACGGACATCAACCTGTCCACCCCTTACCTAGAGGAGGACGGCACCAGCATCCTAGTGTCCTGCAAGAAGTGCAGCGTCCGGGTCCACGCCAGTTGCTACGGGGTCCCCCCTGCAAAGGCTTCTGAAGACTGGATGTGTTCTCGGTGTTCGGCCAATGCCTTGGAAGAGGACTGCTGCTTGTGCTCATTGCGAGGAGGAGCCCTGCAGAGAGCCAATGACGACAGGTGGGTCCATGTCTCATGTGCGGTGGCGATTCTGGAAGCGAGATTTGTCAACATTGCAGAAAGAAGTCCAGTGGATGTGAGCAAAATTCCCCTGCCCCGCTTCAAACTGAAATGTGTCTTCTGCAAGAAACGGAGGAAAAGAACTGCTGGCTGCTGTGTGCAGTGTTCTCATGGCCGTTGCCCAACTGCCTTCCACGTGAGCTGTGCTCAGGCTGCAGGAGTGATGATGCAACCAGATGACTGGCCTTTTGTTGTCTTTATTACCTGCTTTCGGCACAAGATCCCTAATTTGGAGCGTGCCAAGGGGGCCTTGCAGAGCATCACTGCGGGCCAGAAGGTCATTAGCAAGCACAAGAACGGGCGCTTCTACCAGTGTGAGGTGGTAAGGCTCACCACGGAGACCTTCTATGAAGTCAACTTTGATGACGGCTCCTTCAGCGACAATCTCTATCCCGAGGACATAGTGAGTCAGGACTGTCTCCAGTTGGGTCCTCCTGCCGAAGGGGAAGTAGTCCAAGTGAGATGGACAGACGGTCAAGTCTATGGAGCCAAGTTTGTGGCCTCTCACCCCATCCAGATGTACCAGGTGGAGTTTGAGGATGGCTCACAGCTTGTGGTTAAGAGAGATGACGTGTACACGCTGGATGAAGAGCTTCCCAAGAGAGTCAAGTCTAGACTGTCAGTAGCCTCAGACATGCGCTTCAATGAGATTTTCACGGAGAAAGAGGTTAAGCAGGAAAAGAAACGGCAACGAGTTATCAACTCAAGATACCGGGAAGATTACATTGAGCCTGCACTATACCGGGCCATCATGGAGTAG

Related Sequences

bmy_16626T0 Protein

Length: 901 aa      View alignments
>bmy_16626T0
MASESETLNPSARIMTFYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRASYDDIDDLVIPAPIQQLVTGQSGLFTQYNIQKKAMTVREFRKIANSDKCYLISFVTLTKCTPSRLSTESGWSAWPKCSCRKDMVKISMDVFVRKFQPERYKLWKAGKDSTVIDHTLPTPEAAEFLKESELAPRARKEEECPEEDDMEGVEDGEEGDLKRSLAKHRIGTKRHRVCLEIPQEVSQSELFPREELGSGQYDMAECQAALAPVRPTHSSVRQVEDGLTFPDYSDSTEVKFEELKNVKLEEEDEEEEEEEEEEDQEAAALDLSVNPVSFGGRLVFSGSKKKSSSSLGSGSSRDSISSDSETSEPLSCRAQGQTGVLTVHSYAKGDDRVTAGESCTRKKGGATRSINERELAEVADEYMFSLEESKKSKGRRQPLSKLPRHHPLVLQDCVSDDDVSEQGTPEEEAEETEAWAKPLSQLWQNRPPNFEAEKEFNEAMAQQAPHCAVCMIFQTYHQVEFGSLSQNCGSAPDLAPQKQRTKPLIPEMCFTSTGCSTDINLSTPYLEEDGTSILVSCKKCSVRVHASCYGVPPAKASEDWMCSRCSANALEEDCCLCSLRGGALQRANDDRWVHVSCAVAILEARFVNIAERSPVDVSKIPLPRFKLKCVFCKKRRKRTAGCCVQCSHGRCPTAFHVSCAQAAGVMMQPDDWPFVVFITCFRHKIPNLERAKGALQSITAGQKVISKHKNGRFYQCEVVRLTTETFYEVNFDDGSFSDNLYPEDIVSQDCLQLGPPAEGEVVQVRWTDGQVYGAKFVASHPIQMYQVEFEDGSQLVVKRDDVYTLDEELPKRVKSRLSVASDMRFNEIFTEKEVKQEKKRQRVINSRYREDYIEPALYRAIME*