Part of scaffold_1361 (Scaffold)

For more information consult the page for scaffold_1361 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

KCND1 ENSTTRG00000013649 (Bottlenosed dolphin)

Gene Details

potassium voltage-gated channel, Shal-related subfamily, member 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012947, Bottlenosed dolphin)

Protein Percentage 98.76%
cDNA percentage 98.76%
Ka/Ks Ratio 0.12771 (Ka = 0.0048, Ks = 0.0375)

KCND1 ENSBTAG00000009024 (Cow)

Gene Details

Potassium voltage-gated channel subfamily D member 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011882, Cow)

Protein Percentage 97.53%
cDNA percentage 94.65%
Ka/Ks Ratio 0.04538 (Ka = 0.0104, Ks = 0.229)

KCND1  (Minke Whale)

Gene Details

potassium voltage-gated channel, Shal-related subfamily, member 1

External Links

Gene match (Identifier: BACU008486, Minke Whale)

Protein Percentage 94.75%
cDNA percentage 95.83%
Ka/Ks Ratio 0.4481 (Ka = 0.0345, Ks = 0.077)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1947 bp    Location:260578..254334   Strand:-
>bmy_16639
ATGGCAGCAGGCGTGGCCACATGGCTGCCTTTTGCACGGGCGGCCGCAGTGGGCTGGCTGCCCCTGGCCCAGCAGCCCCTGCCCCCCGCGCCGGGGGTGAAGGCATCTCGAGGGGATGAGGTTCTGGTGGTGAACGTGAGCGGACGGCGCTTTGAGACCTGGAAGAACACGCTGGACCGCTACCCAGACACTCTGCTGGGCAGTTCTGAAAAGGAATTCTTCTATGACGCCGACTCAGGCGAGTACTTCTTTGATCGCGACCCAGACATGTTCCGGCACGTGCTCAACTTCTACCGCACGGGCCGACTGCACTGCCCACGGCAGGAGTGCATCCAGGCCTTTGACGAAGAGCTGGCCTTCTATGGCCTGGTGCCTGAGCTTGTGGGCGACTGCTGCCTCGAAGAGTACCGGGACCGCAAGAAGGAGAACGCCGAGCGCCTGGCGGAGGACGAGGAGGCCGAGCAGGCCGGGGACGGCCCATCCCTGCCGGCTGGCAGCTCCCTGCGGCAGCGGCTCTGGCGGGCCTTCGAGAACCCACACACGAGCACCGCGGCCCTCGTTTTCTACTACGTTACCGGCTTTTTCATCGCCGTGTCGGTCATCGCCAACGTGGTTGAGACCATTCCGTGCCGCGGCCCTGCACGGCGGCCCCCGAGGGAGCAGCCCTGCGGCGAGCGCTTCCCGGTGGCCTTTTTCTGCATGGACACGGCCTGTGTACTCATATTCACAGGTGAATACCTTCTGCGGCTGTTCGCGGCCCCTAGCCGTTGCCGCTTCCTGCGGAGTGTAATGAGCCTCATCGACGTGGTGGCCATCCTGCCCTACTACATCGGGCTCCTTGTGCCCAAGAACGAGGATGTCTCGGGCGCCTTTGTCACCCTGCGGGTGTTCCGGGTATTCCGTATCTTCAAGTTCTCCAGGCACTCACAGGGCTTGCGGATTCTGGGCTACACACTCAAGAGCTGTGCCTCTGAGCTGGGCTTTCTCCTCTTTTCCCTTACCATGGCCATCATCATCTTCGCCACTGTTATGTTTTATGCCGAGAAGGGCACAAACAAGACCAACTTTACTAGCATCCCCGCGGCCTTCTGGTATACCATTGTCACCATGACCACACTTGGCTACGGAGACATGGTGCCCAGCACCATTGCTGGCAAGATTTTCGGATCCATCTGCTCACTCAGTGGCGTCTTGGTCATTGCTCTGCCTGTGCCAGTCATTGTGTCCAACTTTAGCCGCATCTACCACCAGAACCAGCGTGCTGACAAGCGCCGAGCACAGCAGAAGGTGCGCTTGGCAAGGATCCGGTTGGCAAAGAGTGGTACCACCAACGCCTTCCTGCRGTACAAGCAGAACGGGGGTCTTGAGGACAGCAGCAGTGGGGAAGAACAGGCGCTGTGTGTCAGGAACCGTTCTGCCTTTGAGCAGCAACATCACCACTTGCTGCATTGTCTAGAGAAGACAACGTGCCATGAGTTCACGGATGAGCTAACCTTCAGTGAGGCCCTGGGCGCTGTCTCGCTGGGTGGCCGCACCAGCCGCAGCACCTCCGTGTCCTCCCAGCCAGTGGGGCCTGGCAGCCTGCTATCCTCTTGCTGCCCCCGCAGAGCCAAGCGCCGTGCCATCCGCCTTGCCAACTCCACTGCCTCGGTCAGCCGTGGCAGCATGCAGGAGCTGGACACGCTGGCAGGGCTGCGGAGGAGCCCTGCCCCTCAGAGCCGCTCAAGCCTCAATGCCAAGCCCCATGACAGCCTTGACTTGAACTGCGACAGCCGGGACTTCGTGGCTGCCATCATCAGTATCCCCACCCCTCCTGCCAACACCCCAGATGAGAGCCAACCTTCCTCCCCTGGCGGTGGTGGCAGTGGGGCCAGCAGCACTCTCAGGAACTCCAGCCTGGGTACCCCTTGCCTCCTTCCCGAGACTGTCAAGATCTCTTCCCTATGA

Related Sequences

bmy_16639T0 Protein

Length: 649 aa      View alignments
>bmy_16639T0
MAAGVATWLPFARAAAVGWLPLAQQPLPPAPGVKASRGDEVLVVNVSGRRFETWKNTLDRYPDTLLGSSEKEFFYDADSGEYFFDRDPDMFRHVLNFYRTGRLHCPRQECIQAFDEELAFYGLVPELVGDCCLEEYRDRKKENAERLAEDEEAEQAGDGPSLPAGSSLRQRLWRAFENPHTSTAALVFYYVTGFFIAVSVIANVVETIPCRGPARRPPREQPCGERFPVAFFCMDTACVLIFTGEYLLRLFAAPSRCRFLRSVMSLIDVVAILPYYIGLLVPKNEDVSGAFVTLRVFRVFRIFKFSRHSQGLRILGYTLKSCASELGFLLFSLTMAIIIFATVMFYAEKGTNKTNFTSIPAAFWYTIVTMTTLGYGDMVPSTIAGKIFGSICSLSGVLVIALPVPVIVSNFSRIYHQNQRADKRRAQQKVRLARIRLAKSGTTNAFLXYKQNGGLEDSSSGEEQALCVRNRSAFEQQHHHLLHCLEKTTCHEFTDELTFSEALGAVSLGGRTSRSTSVSSQPVGPGSLLSSCCPRRAKRRAIRLANSTASVSRGSMQELDTLAGLRRSPAPQSRSSLNAKPHDSLDLNCDSRDFVAAIISIPTPPANTPDESQPSSPGGGGSGASSTLRNSSLGTPCLLPETVKISSL*