Part of scaffold_1361 (Scaffold)

For more information consult the page for scaffold_1361 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TFE3 ENSTTRG00000009064 (Bottlenosed dolphin)

Gene Details

transcription factor binding to IGHM enhancer 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008602, Bottlenosed dolphin)

Protein Percentage 99.77%
cDNA percentage 98.83%
Ka/Ks Ratio 0.0272 (Ka = 0.0011, Ks = 0.0404)

TFE3 ENSBTAG00000008523 (Cow)

Gene Details

Transcription factor E3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011237, Cow)

Protein Percentage 96.34%
cDNA percentage 94.82%
Ka/Ks Ratio 0.11338 (Ka = 0.0177, Ks = 0.1563)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1755 bp    Location:311853..301429   Strand:-
>bmy_16641
ATGTCTCATGCGGCCGAGCCAGCTCGGGACGGCGTAGAGGCCAGCGCGGAGGGTCCTCGAGCCGTGTTCCTGCTGTTGGAGGAGCGCAGGCCGGCCGACTCGGCCCAGCTGCTCAGCCTGAACTCTTTGCTTCCGGAATCGGGGATTGTTGCTGACATCGAATTAGAAAACGTCCTTGATCCTGACAGCTTCTACGAGCTCAAAAGCCAACCCCTATCGCTACGCTCAAGCCTCCCAATATCACTGCAGGCCACACCAGCCACCCCAGCTACACTCTCTGCATCATCTTCTGCAGGGGGCTCCAGGACCCCTGCCATGTCGTCATCTTCTTCATCGCGGGTCTTGCTGCGGCAGCAGCTAATGCGGGCCCAGGCCCAGGAGCAGGAGAGGCGTGAGCGTCGGGAACAGGCTGCAGCCTCTCCCTTCCCTAGTCCTGCACCTGCCTCTCCTGCCATCTCTGTGGTCGGCGTCTCTGCTGGGGGCCACACATTGGGTCGTCCTCCCCCTGCTCAGGTGCCCAGGGAGGTGCTCAAGGTGCAGACCCATCTGGAGAACCCGACGCGCTACCACCTGCAGCAGGCGCGCCGGCAGCAGGTGAAGCAGTACCTGTCCACCACACTTGGGCCCAAGCTGGCGTCCCAGGCCCTCACCCCACCACCGGGGGCTGCTAGTGCCCAGCCACTCCCCGCCCCTGAGGCTGCCCACGCTACTGGCCCCACTGGCAGTGCTCCCAACAGCCCCATGGCGCTGCTCACCATCGGGTCTAGCTCGGAGAAGGAGATTGATGATGTCATCGATGAGATCATCAGCCTGGAGTCCAGTTACAACGATGAGATGCTCAGCTATCTGCCCGGAGGCACCACGGGGTTGCAGCTCCCCAGCACGCTGCCTGTGTCAGGGAATCTGCTTGATGTGTACAGTAGTCAGGGCGTGGCCACGCCAGCCATCACTGTCAGCAACTCCTGTCCAGCTGAGCTGCCGAATATCAAACGGGAGATCTCTGAGACAGAGGCCAAGGCCCTTTTGAAGGAACGGCAGAAGAAAGACAATCACAACCTGATTGAACGTCGCAGGCGATTCAACATTAACGACAGGATCAAGGAGTTGGGCACCCTCATCCCCAAGTCCAGTGACCCGGAGATGCGCTGGAACAAGGGCACCATCTTGAAAGCCTCTGTGGATTACATCCGCAAGTTGCAGAAGGAGCAACAGCGCTCCAAAGACCTGGAGAGCCGGCAGCGATCCCTGGAGCAAGCCAACCGCAGCCTGCAGCTCCGAATTCAGGTCTGGAAGGAGGAGGCGGTGGCAGGGGAGCTAGAACTGCAGGCCCAGATCCATGGTCTGCCAGTGCCTCCCACCCCAGGGCTGCTCTCACTGGCCACAACTTCAGCCTCTGACAGTCTCAAGCCAGAGCAGCTGGATGTTGAAGAGGAGGGCAGGCCAGGCACAGCAACATTTCATGCAGCGGGGGGACCTGCCCAGAGTACTCCCCATCAGCAGCCCCCAGCGCCACCCTCAGATGCCCTTCTGGACCTGCACTTTCCCAGCGACCACCTGGGGGATCTGGGGGACCCCTTCCACCTGGGGCTGGAGGACATTCTGATGGAGGAGGAGGAGGGGGTGGTGGGGGGACTGTCAGGGGGCGCCCTGTCCCCACTGCGGGCTGCCTCCGATCCCCTGCTTTCTTCAGTATCCCCCGCAGTCTCCAAGGCCAGCAGTCGCCGCAGCAGCTTCAGCATGGAGGAGGAGTCCTGA

Related Sequences

bmy_16641T0 Protein

Length: 585 aa      View alignments
>bmy_16641T0
MSHAAEPARDGVEASAEGPRAVFLLLEERRPADSAQLLSLNSLLPESGIVADIELENVLDPDSFYELKSQPLSLRSSLPISLQATPATPATLSASSSAGGSRTPAMSSSSSSRVLLRQQLMRAQAQEQERRERREQAAASPFPSPAPASPAISVVGVSAGGHTLGRPPPAQVPREVLKVQTHLENPTRYHLQQARRQQVKQYLSTTLGPKLASQALTPPPGAASAQPLPAPEAAHATGPTGSAPNSPMALLTIGSSSEKEIDDVIDEIISLESSYNDEMLSYLPGGTTGLQLPSTLPVSGNLLDVYSSQGVATPAITVSNSCPAELPNIKREISETEAKALLKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSSDPEMRWNKGTILKASVDYIRKLQKEQQRSKDLESRQRSLEQANRSLQLRIQVWKEEAVAGELELQAQIHGLPVPPTPGLLSLATTSASDSLKPEQLDVEEEGRPGTATFHAAGGPAQSTPHQQPPAPPSDALLDLHFPSDHLGDLGDPFHLGLEDILMEEEEGVVGGLSGGALSPLRAASDPLLSSVSPAVSKASSRRSSFSMEEES*