Part of scaffold_1361 (Scaffold)

For more information consult the page for scaffold_1361 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PRICKLE3 ENSTTRG00000016969 (Bottlenosed dolphin)

Gene Details

prickle homolog 3 (Drosophila)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016086, Bottlenosed dolphin)

Protein Percentage 97.91%
cDNA percentage 98.25%
Ka/Ks Ratio 0.23567 (Ka = 0.0101, Ks = 0.0429)

LMO6 ENSBTAG00000016095 (Cow)

Gene Details

prickle-like protein 3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000021427, Cow)

Protein Percentage 93.63%
cDNA percentage 93.23%
Ka/Ks Ratio 0.14989 (Ka = 0.0317, Ks = 0.2113)

PRICKLE3  (Minke Whale)

Gene Details

prickle homolog 3 (Drosophila)

External Links

Gene match (Identifier: BACU009768, Minke Whale)

Protein Percentage 85.42%
cDNA percentage 89.38%
Ka/Ks Ratio 0.66261 (Ka = 0.1064, Ks = 0.1605)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2148 bp    Location:421286..412443   Strand:-
>bmy_16648
ATGCACACGAAGCGTCAATACAAGTACTGTAGCGCACACTCCTTGCAGTCAGGTCGCCACTTCCAAGTTCCCACTCCACCACTACAGAGCCCTCAAGCCCTAGAATGTCCTGTGAGAGACCATGTGGAACCCTGGGGGCTCTGGGGGCCGTGTTTTCTGAGGCCCAGCTGCAGCCCAGGCAGGAGTGCAAGGAAGCTTTCGCGCACGGCGTTCCTGGGCTGCGCGCCCCTCACCTCTAGGCAGGGGGCGCCTTGGCCCGGGAGAGACAACAGGCCCAGGGGCGGACCCCGCTGGGCGCGCTCCTCCTACGCCGGTGTCAGGTTTACGGAACCGAGAGCTCCCCTGCCGGACGCGCGGTGGCCAGACGGCCACAAGGATTCCATTCGCCTGACCCGGCCCGGCTTGACCCTGCCCGGGCGCGCCATGTTCGCGCGTGGGTCCCGGAGGCGCCGCTCCGGGCGCGCGCCTCAAGAGGCAGAGGACCCAGACCGCGGCCAGCCCTGCAACTCCTGCAGGGAGCAGTGCCCCGGCTTCCTGCTGCATGGCTGGAGAAAGATCTGCCAGCACTGCAAATGCCCACGGGAGGAGCACGCCGTGCACGCAGTGCCTGTGGACCTGGAACGCATCATGTGTCGGCTAATCTCAGACTTCCAGCGCCACTCCATCTCTGACGACGACTCTGGCTGTGCCTCGGAGGAGTATGCCTGGGTGCCCCCTGGTCTCAAGCCCGAGCAGGCACAGTACTGCACAGCACTGGAAGAGGAAGAGAAGAAAGAGCTCAGAGCCTTCAGCCAGCAGCGGAAGCGGGAGAATCTGGGGCGTGGCACCGTGCGCATCTTCCCCGTGACCATCACTGGGGCCATCTGTGAGGAGTGCGGGAAGCAGATTGGAGGTGGGGACATCGCCGTGTTTGCCAGCCGTGCAGGCCTGGGTGCCTGCTGGCACCCACAGTGCTTTGTGTGCTCCACGTGCCGGGAGCTGCTGGTGGACCTCATCTACTTCTACCATGCTGGCAAGGTCTACTGTGGTCGCCACCATGCTGAACGCCTGCGCCCGCGCTGCCAAGCCTGTGACGAGATCATCTTCTCCCCTGAGTGCACAGAGGCCGAGGGCCGGCACTGGCACATGGGTCACTTCTGCTGCTTTGAGTGTGAAGCGTCACTGGGAGGGCAGCGCTATGTCATGCGTCAGAGCCGCCCCCACTGCTGCGCCTGCTACGAGGCCCGCCACGCGGAGTATTGTGATGGCTGTGGGGAGCACATTGGCCTGGACCAGGGCCAGATGGCTTATGAGGGCCAGCACTGGCACGCCTCAGACCGCTGCTTCTGCTGCAGTCGCTGTGGGCGAGCCCTCCTGGGCCGCCCCTTCCTGCCACGCCGTGGCCTAATCTTCTGCTCCCGAGCCTGCAGCCTGGGGTCCGAGCCCACGGCTCCGGGGCCCGGCCGCCGCAGCTGGAGCGCAGGCACGGTCTCCACACCTCTCACAGCCTCTACAGCCTCTTTCTCTGCTGTGGAGGGGGCGTCTGAGACCTCCACCAAAGGCACCAGCACCGAGCCAGCGCCTGCTGCAGGCCCCGAGGAGCCTGCCCGCTTTCTGAGAGGGGCCCCTCACCGCCACTCCATGCCCGAGCTGGGGCTCCGCAGTGCCCCTGAACCACCCTCAGGGCCTCCTGGCCAGCCGGACCCGCGCCCAGAAGATGGTGCCTTTGGTCGCCAGAGCACCCCACGCGTCAGCTTCCGCGACCCTTTGGTGTCTGAGGGAGGCCCGCGGCGGTCCCTGAGTGTGCCCCCAGCCCAGCGCCGCAGGCCACGCAGCCCCCCGCCCAGGGGCCCCACACATCGCCGCCACCACCACCACCACCATCACCGCTGCCACTCCGGCAGACGTCGCCACCATCAATGTGACTTGGGATCAGGGTCGGACTCGGGATCTTGCTCCAGCTCGCCCTCCAGTCCCAGTTCCGAATCCTCAGAGGACGACGGCTTCTTCCTAGGGGAACGCATCCCACTGCCCCCGCACCTGTGCAGGCCAATGCCTGCTCAGGACACTGCAACTGAGACCCCCAATTCCCCATCTCCACAGCTCCCCAGGAACTCTCGCCCAGGGATGCCTCGCCAGGCCAGAGACAAGAACTGCATCGTGGCTTGA

Related Sequences

bmy_16648T0 Protein

Length: 716 aa      View alignments
>bmy_16648T0
MHTKRQYKYCSAHSLQSGRHFQVPTPPLQSPQALECPVRDHVEPWGLWGPCFLRPSCSPGRSARKLSRTAFLGCAPLTSRQGAPWPGRDNRPRGGPRWARSSYAGVRFTEPRAPLPDARWPDGHKDSIRLTRPGLTLPGRAMFARGSRRRRSGRAPQEAEDPDRGQPCNSCREQCPGFLLHGWRKICQHCKCPREEHAVHAVPVDLERIMCRLISDFQRHSISDDDSGCASEEYAWVPPGLKPEQAQYCTALEEEEKKELRAFSQQRKRENLGRGTVRIFPVTITGAICEECGKQIGGGDIAVFASRAGLGACWHPQCFVCSTCRELLVDLIYFYHAGKVYCGRHHAERLRPRCQACDEIIFSPECTEAEGRHWHMGHFCCFECEASLGGQRYVMRQSRPHCCACYEARHAEYCDGCGEHIGLDQGQMAYEGQHWHASDRCFCCSRCGRALLGRPFLPRRGLIFCSRACSLGSEPTAPGPGRRSWSAGTVSTPLTASTASFSAVEGASETSTKGTSTEPAPAAGPEEPARFLRGAPHRHSMPELGLRSAPEPPSGPPGQPDPRPEDGAFGRQSTPRVSFRDPLVSEGGPRRSLSVPPAQRRRPRSPPPRGPTHRRHHHHHHHRCHSGRRRHHQCDLGSGSDSGSCSSSPSSPSSESSEDDGFFLGERIPLPPHLCRPMPAQDTATETPNSPSPQLPRNSRPGMPRQARDKNCIVA*