Part of scaffold_1361 (Scaffold)

For more information consult the page for scaffold_1361 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SYP ENSTTRG00000016970 (Bottlenosed dolphin)

Gene Details

synaptophysin

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016087, Bottlenosed dolphin)

Protein Percentage 97.12%
cDNA percentage 97.23%
Ka/Ks Ratio 0.27554 (Ka = 0.0192, Ks = 0.0695)

SYP ENSBTAG00000016096 (Cow)

Gene Details

synaptophysin

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000021428, Cow)

Protein Percentage 94.57%
cDNA percentage 93.4%
Ka/Ks Ratio 0.12723 (Ka = 0.0307, Ks = 0.2414)

SYP  (Minke Whale)

Gene Details

synaptophysin

External Links

Gene match (Identifier: BACU009767, Minke Whale)

Protein Percentage 97.12%
cDNA percentage 97.34%
Ka/Ks Ratio 0.29528 (Ka = 0.0191, Ks = 0.0646)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 987 bp    Location:433123..426307   Strand:-
>bmy_16649
GGTCATTGCCTGGTGGCCTTGTCCCTCACCTCCCTCTCCATCCCCAACAACCCCACGCCTCCCCACCGTTTCTCTCCTCAGCTGGTGGCCGGGGGTCAGTTCCGGGTGGTCAAGGAGCCCCTCGGCTTTGTGAAGGTGCTGCAATGGGTCTTTGCCATCTTCGCCTTTGCCACATGCGGCAGTTACAGTGGGGAGCTCCAGCTGAGTGTGGACTGTGCCAACAAGACCAAGAGTGACCTCAACATCGAGGTCGAATTCGAGTACCCCTTCAGGCTGTACCAAGTGTACTTTGAGGCACCCACCTGCCAAGGAGACCCTAAAAATATCTTCCTCGTGGGGGACTACTCCTCATCAGCTGAATTCTTTGTCACCGTGGCCGTATTTGCCTTCCTCTACTCCATGGGGGCTCTGGCTACCTACATCTTCCTGCAGAACAAGTACCGAGAGAACAACAAAGGGCCCATGCTGGACTTTCTGGCCACGGCAGTGTTCGCCTTCATGTGGCTGGTTAGCTCGTCGGCCTGGGCCAAGGGGCTGTCAGATGTGAAGATGGCCACGGACCCAGAGAACATTATCAAGGGGATGCCTGTCTGCCACCAGACGGGGAATACATGCAAGGAACTGAGGGACCCTGTGACCTCTGGCCTCAACACCTCGGTGGTGTTTGGCTTCCTGAACCTGGTGCTCTGGGTCGGCAACCTATGGTTCGTGTTCAAGGAGACAGGCTGGGCCGCCCCATTCCTGCGCGCTCCTCCCGGCGCCCCCGAGAAGCAACCGGCGCCCGGGGATGCCTACGGCGAGGCAGGCTACGGGCAGGGCCCCGGCGGGTACGGGCCCCAGGACTCCTACGGGCCCCAGGGCGGCTATCAGCCTGACTACGGGCAGCCCGCCGGTGGCGGTGGCGGTGGCTACGGGCCTCAGGGCGACTACGGGCAGCAAGGCTATGGCCCTCAGGGTGCGCCCACCTCCTTCTCCAATCAGATGTAG

Related Sequences

bmy_16649T0 Protein

Length: 329 aa      View alignments
>bmy_16649T0
GHCLVALSLTSLSIPNNPTPPHRFSPQLVAGGQFRVVKEPLGFVKVLQWVFAIFAFATCGSYSGELQLSVDCANKTKSDLNIEVEFEYPFRLYQVYFEAPTCQGDPKNIFLVGDYSSSAEFFVTVAVFAFLYSMGALATYIFLQNKYRENNKGPMLDFLATAVFAFMWLVSSSAWAKGLSDVKMATDPENIIKGMPVCHQTGNTCKELRDPVTSGLNTSVVFGFLNLVLWVGNLWFVFKETGWAAPFLRAPPGAPEKQPAPGDAYGEAGYGQGPGGYGPQDSYGPQGGYQPDYGQPAGGGGGGYGPQGDYGQQGYGPQGAPTSFSNQM*