Sequence detailsbmy_16650 (Coding sequence)

Part of scaffold_1361 (SequenceType object (1))

For more information consult the page for scaffold_1361 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CACNA1FENSTTRG00000016971 (Bottlenosed dolphin)

Gene Details

calcium channel, voltage-dependent, L type, alpha 1F subunit

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000016088, Bottlenosed dolphin)

Protein Percentage 83.4%
cDNA percentage 84.27%
Ka/Ks Ratio 0.38259 (Ka = 0.0176, Ks = 0.0459)

CACNA1FENSBTAG00000016097 (Cow)

Gene Details

voltage-dependent L-type calcium channel subunit alpha-1F

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000021433, Cow)

Protein Percentage 96.09%
cDNA percentage 94.58%
Ka/Ks Ratio 0.11086 (Ka = 0.0201, Ks = 0.1816)

Additional orthologs identified in other species via the OPTIC pipeline.

CACNA1F (Human)   Cacna1f (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 5670 bp    Location:461586..437560   Strand:-
Raw sequence 
>bmy_16650
ATGGCGGCATCTGAAGGCGGGAAAGACACCACCCCAGAGCCCAGTCCAGCCAACGGGACAGGCCCTGGGCCCGAATGGGGGCTGTGCCCTGGGCCCCCAGCATCAGGTGGTGAAATCGGCGGGGCATCCAGCCTGGGGACCCCTAAGCGAAGGACTCAGCACAGTAAGCACAAGACAGTGGCAGTGGCCAGTGCCCAGCGCTCACCCCGGGCACTCTTCTGCCTCACCCTGGCAAACCCCCTGCGGCGGCCCTTCGACATCCTCATCCTGCTGACCATCTTTGCCAACTGCGTGGCCCTTGGGGTCTACATCCCCTTCCCAGAGGATGACTCCAACACTGCCAACCACAACCTGACCGTGCTCAAGATCGTGGCCTACGGGCTGGTGCTCCACCCCAGCGCCTACATCCGCAATGGCTGGAACCTGCTCGACTTCATCATCGTCGTGGTCGGGCTGTTCAGCGTGCTGCTGGAGCAGGGGCCCGGACGCCCGGGGGACGCCCCGCATACCGGAGGGAAGCCGGGGGGCTTCGATGTGAAGGCGTTGCGGGCGTTTCGGGTGCTGAGGCCACTGAGGCTGGTGTCCGGGGTCCCGAGCCTGCACATAGTGCTCAATTCCATCATGAAGGCGCTGGTGCCGCTGCTGCATATCGCACTTCTCGTGCTCTTTGTCATCATCATTTACGCCATCATCGGGCTCGAGCTGTTCCTCGGACGCATGCACAAAACGTGCTACTTCCTGGGATCTGACGTAGAGGCGGAGGAGGACCCATCGCCCTGTGCGTCATCGGGATCGGGGCGTGCTTGTACGCTGAACCAGACCGAGTGCCGCGGACGCTGGGCAGGTCCCAACGGAGGCATCACCAACTTCGACAATTTCTTCTTTGCCATGCTGACAGTCTTCCAGTGCATCACCATGGAAGGCTGGACTGACGTGCTCTACTGGATGCAGGATGCCATGGGGTATGAGCTGCCCTGGGTGTATTTCGTGAGTCTTGTCATCTTTGGATCCTTCTTCGTCCTCAACCTTGTACTTGGTGTCCTGAGTGGAGAGTTCTCCAAGGAGAGGGAGAAGGCAAAAGCACGAGGGGACTTCCAGAAGCTTCGAGAGAAGCAGCAGCTGGAGGAGGACCTGCGGGGCTACCTGGACTGGATCACACAGGCGGAGGAGCTGGACATGGAGGACCCCTCAGCTGATGGCAACTTTGGTTCTGTGGCTCAAGAAGGCCAGGCCAGCCACCGGCCACAACTGGCAGAGATGACCAATAGGAAACGAGGACGTCTGCACTGGTTCAGTCACTCCACCCACTCCACACACTCCACCAGCAGCCACGCCAGCCTCCCAGCCAGTGACACCGGTTCGATGGCAGAGACCCCAGGCGATGAGGAAGAGGAAGAGGGGGCTCTGGCCAGCTGTACACGCTGCCTCCGCTGCCTCCGCCGAGCCAACCGGGGCCTTCGGGCGCGCTGCCGGCGGGCTGTGAAGTCCAATGCCTGCTACTGGGCCGTGCTGCTGCTCGTCTTCCTCAACACGCTGACCATCGCCTCGGAGCACTACGGGCAGCCCATCTGGCTCACCCAGATCCAGGAGTATGCCAACAAAGTGTTGCTCTGTCTGTTCACGGTGGAGATGCTTCTCAAGTTATATGGTCTGGGGCCCTCTGTCTACGTCTCCTCCTTCTTCAACCGCTTTGACTGCTTCGTGGTCTGTGGGGGCATCCTGGAGACCACCCTGGTGGAGGTGGGCGCCATGCAGCCCCTGGGCATCTCGGTGCTCCGCTGTGTGCGCCTCCTCAGGATCTTTAAGGTCACCAGGCACTGGGCATCTCTGAGCAATTTAGTGGCGTCCCTGCTCAATTCAATGAAATCCATTGCATCCTTGCTGCTTCTCCTCTTCCTCTTTATCATCATCTTCTCCCTGCTTGGCATGCAGCTGTTTGGGGGCAAGTTCAACTTTGACCAGACCCACACCAAGCGAAGCACCTTTGACACCTTCCCCCAGGCCCTCCTCACTGTCTTTCAGATCCTGACAGGTGAGGACTGGAATGTGGTCATGTATGATGGTATCATGGCCTATGGCGGCCCCTTCTTCCCAGGGATGCTGGTATGCGTGTACTTCATCATCCTCTTCATCTGTGGCAACTACATCCTGTTGAACGTGTTTCTTGCCATTGCTGTGGACAACCTGGCCAGTGGAGATGCAGGCACTGACAAGGGCAAGGGCAGGTGCCTGGTGGGGAGAATGAGGAAGAGGAAGGTGCAAAAAATGAAGGAGCAGGCAAGTGGGCAAGGCCAGGTGGAAGAGGAAGTTGTACCCAAGGAGAAGGTGGTACCCATCCCTGAGGGCAGCGCCTTCTTCTGCCTCAGCCAAACCAACCCGCTGAGGAAGGCCTGCCACACCCTCATCCACCATCACGTCTTCACCAATCTTATCCTGGTGTTCATCATCCTCAGCAGTGTGTCCCTGGCAGCTGAGGACCCCATCCGAGCCCACTCCTTCCGCAACCACATTCTGGGGTACTTCGATTATGCCTTCACCTCCATTTTCACTGTGGAGATTCTACTAAAGATGACAGTGTTCGGGGCTTTCCTGCACCGTGGCTCCTTCTGCCGTAGCTGGTTCAATCTGTTGGATCTGCTGGTGGTCAGCGTGTCCCTCATCTCCTTTGGCATCCACTCCAGTGCCATCTCGGTGGTGAAGATTCTTCGAGTACTCCGAGTACTACGGCCCCTCCGAGCCATCAACAGGGCCAAAGGACTCAAGCACGTGGTGCAGTGTGTGTTCGTGGCCATCCGGACCATCGGGAATATCATGATTGTGACCACGCTCCTGCAATTCATGTTCGCCTGCATTGGCGTGCAGCTCTTCAAGGGGAAATTCTACAGTTGCACTGATGAGGCCAAACACACACCCCAAGAATGCAAGGGCTCCTTCCTGGTCTACCCCGATGGAGATGTGTCAAGGCCCCTGGTCCGGGAGCGGCTCTGGGTCAACAGTGATTTCAACTTTGACAATGTCCTTTCAGCCATGATGGCCCTGTTCACTGTCTCCACCTTCGAAGGCTGGCCTGCGCTGCTATACAAGGCCATCGATGCAAACGCGGAGAACAAGGGCCCCATCTATAATTACCACGTGGAGATCTCAGTGTTCTTCATTGTCTACATCATCATCATTGCATTCTTCATGATGAACATCTTTGTGGGCTTCGTCATCATCACCTTCCGTGCCCAGGGCGAGCAGGAGTACCAAGACTGTGAGCTGGACAAGAACCAGCGCCAGTGTGTGGAGTATGCCCTCAAGGCCCAGCCACTCCGCCGCTATATCCCCAAGAACCCGCATCAGTATCGGGTGTGGGCCACTGTGAACTCTGCTGCCTTCGAGTATCTCATGTTCCTGCTCATCCTGCTCAACACGGTTGCTCTAGCCATGCAGCACTATGAGCAGACTGCTCCCTTCAACTATGTCATGGACATCCTCAACATGGTTTTCACTGGCCTCTTCACTGTTGAGATGGTGCTCAAAATCATCGCCTTCAAACCCAAGCATTACTTTACCGATGCCTGGAACACGTTTGATGCTCTTATTGTGGTGGGCAGCGTAGTGGACATTGCCGTCACTGAAGTCAACAGCTCTGAGGACAGTTCCCGCATTTCGATCACTTTCTTTCGCCTCTTCCGAGTCATGCGGCTGGTCAAGCTTCTCAGTAAGGGTGAAGGGATTCGCACATTACTCTGGACATTCATCAAGTCCTTTCAGATTTTCGGCAAGGTGGCTCTTCAGGATGGCACACAGATCAACCGAAACAACAACTTCCAGACCTTTCCACAGGCTGTGCTGCTTTTGTTCAGGTGTGCTACTGGTGAGGCATGGCAGGAGATAATGCTTGCCAGCCTTCCTGGGAGCCGGTGTGACCCTGAGTCTGACTTCGGCCCTGGTGAGGAGTTTAGCTGTGGTAGCAATTTTGCCATAGCCTATTTTATCAGCTTCTTCATGCTCTGTGCATTCCTGATCATAAATCTCTTTGTGGCTGTGATCATGGACAACTTTGATTATCTAACCAGAGACTGGTCCATCCTGGGCCCCCATCACCTCGATGAATTCAAGAGGATCTGGTCTGAATATGACCCTGGGGCCAAAGGCCGCATCAAGCACCTGGATGTGGTTGCCCTGCTGAGACGCATCCAGCCACCCCTGGGATTCGGGAAGCTGTGCCCACACCGAGTGGCCTGCAAGAGACTTGTGGCGATGAACATGCCTCTCAACTCAGATGGGACAGTGACATTCAATGCCACACTCTTTGCCCTCGTTCGGACATCCCTGAAGATCAAGACAGAAGGGAACCTGGAGCAAGCCAATCAGGAGCTGCGGATTGTCATCAAAAAGATCTGGAAGCGGATGAAGCAGAAGCTGCTAGATGAGGTCATCCCCCCAGCTGATGAGGAAGAAGTTACCGTGGGCAAATTCTACGCCACATTTCTGATCCAGGACTATTTCCGCAAATTCCGGCGGAGGAAAGAAAAGGGGCTACTAGGGGCCGAGGCCCCCCCAAGCACCTCCTCTGCCCTTCAGGCTGGTCTGAGGAGCCTGCAAGACTTGGGTCCTGAGATTCGGCAGGCCCTCACCTGTGACACAGATGAGGAGGAGGAGGAAGAGGGGCAGGAGGGAGAGGAGGAGGAAGATGAGAAGGACCCGGAAACGTACAAAGCCCCAATGGGCTCCCAGCCCCCATCTCGCCGGAGCTCTGTGATTTCTGTGTCTCTGCCTGCCGGGGACAAACCACCAGATTCACTTTCCCTTGGGCCCAGTGATGACGATGGGGGTGCTCCCAACTCCAGACAGTCCAGTGTGCCCCAGGCTGGGTCCCACGCCCACAGGAGAAGCTCTGGGGTTCTCATTTTCACCATTCCGGAAGAAGGAAGTTCTCAGTCCAAGCCAACCAAAGGGCAAGAGAAGCAGGATGAACAAGAGGAAGTCCCCAGCCAGCACTCTGGCCATGACACGCTCTCCTACCTAGATGAGCAGGCAGGGGCTCCCCTACGCCCCATCCTTTTGCCACCTCACAGACCCCAGAGATATGTGGATGGCCACCAAGCACCACGCCGCCGTCTGCTGCCCCCAACGCCTGCAGGCCGGAAGCCTTCCTTCACCATCCAGTGCCTGCGGCGCCAGGGCAGTTGTGAAGATTTACCCATCCCAGGCACCTATCATCGTGGGCGCAACTCAGGGCCCAGCAGGGCACAGGGTTCCTGGGCAACCCCTCCTCAGCRGGGCCGGCTCCTATACGCCCCACTGTTACTGGTGGAGGAGGGTGCAGCAGGGGACGGATACCTTGGCAAATCCAGCGGTCCACTGCGCACCTTCACCTGTCTGCACGTGCCTGGAACCCACTCAGACCCCAGCCATGGCAAAAGGGGCAGTGCTGACAGCCTGGTGGAGGCTGTGCTCATCTCCGAGGGCCTGGGCCTGTTTGCCCGAGACCCGCGCTTCGTGGCCCTGGCCAAGCAGGAGATTGCAGATGCATGTCGCCTGACACTGGACGAGATGGACAGTGCCGCCAGTGACCTGCTGGCACAGGGGACCAGCTCACTKTATAGTGACGAGGAGTCCATCCTCTCCCGGTTTGATGAGGAGGACCTGGGAGACGAGATGGCCTGCGTCCATGCCCTCTGA

Related Sequences

bmy_16650T0 SequenceType object (3)

Length: 1890 aa      View alignments
>bmy_16650T0
MAASEGGKDTTPEPSPANGTGPGPEWGLCPGPPASGGEIGGASSLGTPKRRTQHSKHKTVAVASAQRSPRALFCLTLANPLRRPFDILILLTIFANCVALGVYIPFPEDDSNTANHNLTVLKIVAYGLVLHPSAYIRNGWNLLDFIIVVVGLFSVLLEQGPGRPGDAPHTGGKPGGFDVKALRAFRVLRPLRLVSGVPSLHIVLNSIMKALVPLLHIALLVLFVIIIYAIIGLELFLGRMHKTCYFLGSDVEAEEDPSPCASSGSGRACTLNQTECRGRWAGPNGGITNFDNFFFAMLTVFQCITMEGWTDVLYWMQDAMGYELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLRGYLDWITQAEELDMEDPSADGNFGSVAQEGQASHRPQLAEMTNRKRGRLHWFSHSTHSTHSTSSHASLPASDTGSMAETPGDEEEEEGALASCTRCLRCLRRANRGLRARCRRAVKSNACYWAVLLLVFLNTLTIASEHYGQPIWLTQIQEYANKVLLCLFTVEMLLKLYGLGPSVYVSSFFNRFDCFVVCGGILETTLVEVGAMQPLGISVLRCVRLLRIFKVTRHWASLSNLVASLLNSMKSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDQTHTKRSTFDTFPQALLTVFQILTGEDWNVVMYDGIMAYGGPFFPGMLVCVYFIILFICGNYILLNVFLAIAVDNLASGDAGTDKGKGRCLVGRMRKRKVQKMKEQASGQGQVEEEVVPKEKVVPIPEGSAFFCLSQTNPLRKACHTLIHHHVFTNLILVFIILSSVSLAAEDPIRAHSFRNHILGYFDYAFTSIFTVEILLKMTVFGAFLHRGSFCRSWFNLLDLLVVSVSLISFGIHSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYSCTDEAKHTPQECKGSFLVYPDGDVSRPLVRERLWVNSDFNFDNVLSAMMALFTVSTFEGWPALLYKAIDANAENKGPIYNYHVEISVFFIVYIIIIAFFMMNIFVGFVIITFRAQGEQEYQDCELDKNQRQCVEYALKAQPLRRYIPKNPHQYRVWATVNSAAFEYLMFLLILLNTVALAMQHYEQTAPFNYVMDILNMVFTGLFTVEMVLKIIAFKPKHYFTDAWNTFDALIVVGSVVDIAVTEVNSSEDSSRISITFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSFQIFGKVALQDGTQINRNNNFQTFPQAVLLLFRCATGEAWQEIMLASLPGSRCDPESDFGPGEEFSCGSNFAIAYFISFFMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPGAKGRIKHLDVVALLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVTFNATLFALVRTSLKIKTEGNLEQANQELRIVIKKIWKRMKQKLLDEVIPPADEEEVTVGKFYATFLIQDYFRKFRRRKEKGLLGAEAPPSTSSALQAGLRSLQDLGPEIRQALTCDTDEEEEEEGQEGEEEEDEKDPETYKAPMGSQPPSRRSSVISVSLPAGDKPPDSLSLGPSDDDGGAPNSRQSSVPQAGSHAHRRSSGVLIFTIPEEGSSQSKPTKGQEKQDEQEEVPSQHSGHDTLSYLDEQAGAPLRPILLPPHRPQRYVDGHQAPRRRLLPPTPAGRKPSFTIQCLRRQGSCEDLPIPGTYHRGRNSGPSRAQGSWATPPQXGRLLYAPLLLVEEGAAGDGYLGKSSGPLRTFTCLHVPGTHSDPSHGKRGSADSLVEAVLISEGLGLFARDPRFVALAKQEIADACRLTLDEMDSAASDLLAQGTSSLYSDEESILSRFDEEDLGDEMACVHAL*