Sequence detailsbmy_16653 (Coding sequence)

Part of scaffold_1361 (SequenceType object (1))

For more information consult the page for scaffold_1361 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PPP1R3FENSTTRG00000016974 (Bottlenosed dolphin)

Gene Details

protein phosphatase 1, regulatory subunit 3F

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000016091, Bottlenosed dolphin)

Protein Percentage 71.95%
cDNA percentage 72.7%
Ka/Ks Ratio 0.48494 (Ka = 0.0116, Ks = 0.0239)

PPP1R3FENSBTAG00000021100 (Cow)

Gene Details

protein phosphatase 1 regulatory subunit 3F

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000028107, Cow)

Protein Percentage 92.43%
cDNA percentage 94.33%
Ka/Ks Ratio 0.32656 (Ka = 0.0386, Ks = 0.1181)

PPP1R3F (Minke Whale)

Gene Details

protein phosphatase 1, regulatory subunit 3F

External Links

Gene match (Identifier: BACU009764, Minke Whale)

Protein Percentage 98.14%
cDNA percentage 99.1%
Ka/Ks Ratio 0.90579 (Ka = 0.0089, Ks = 0.0098)

Additional orthologs identified in other species via the OPTIC pipeline.

PPP1R3F (Human)   Ppp1r3f (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2436 bp    Location:495078..514720   Strand:+
Raw sequence 
>bmy_16653
ATGGCGCGCACGGCCCCTGTGGAGCCCCCGCTGCGGCATCCCGCGCCCCCCTCGCCGGCCGCGGGCGAGCCCCGTACCTCAGTCGAGGCAGCGGTGGCCCCGCGGAGGGTGCTGTTCGCCGACGAGGCCTTGGGGCTGCCGCTGGCGCAGCTGCGCCGCTACCGGCCGTGGGGCGGGCCCGGGGCGGGCAAGATGGCGGTGGCGGCCGGGCAAGATGGCGTCGGCGGCGGGGCTGACGAGGACGACGATGGCGAGGATGGGGATGAAGGGGAGGAGGAAGAGGAGGCGTGCCCCGAGCCCTCGCCGCTGTGCCCCGTTCCCGCTGGCGGGGGGTTTTACCTGGTGCCCACATTTTCGCTGCCGCCCGCGCCGGGCCGTCTGGAGCGCTTGGGGCGCGTCATGGTGGAGCTGGAGGCACTGCTGCCGCCTCCCGGAGCGGTCCCCGGGGGTGCCGGGGTGTGGGTGCCTGGGGGGCGCCCGCCGGTGCTGCGCGGGTTGGTCCGCGTGCTGAACCGCTCCTTCGAGAAGGCGGTGCACGTGCGGGCCTCACACGACGGCTGGGCTTCCTTCTGCGACCACCCAGCGCGCTACGTCCCGCGCAGCCCGCCGGGGGCAGGAGCGGGAGGACCAGGAGCAGGAGATCCCATCCTGGATCTGGGCCTTGGCTTGGGCCCCGGCCAGGCGCCCACCTCCTCGCCCGACGACGGCGGCCGCACCGACCGCTTTGCCTTCCAGCTGCCCTTTGCTGAGGGTGCGGGCGATGGGGCGCGCCTGGACTTCGTGGTGCGCTATGAGACCCCCGAGGGCACTTTCTGGGCCAACAACCACGGCCGCAACTACACAGTCCTGCTCCGGATTGCACCCGTTCCCACACCCACTGATGCCGAAGGGCTGCCGCAGCAGCAGCAGCTGCAGCAGCTGGAGCCACAGCCCGAGTGCCAGGGTCCCGTGGAGGCTGAGGCCAGGCAGCTGAAGAGCTGCATGAAGCCGGTGAGGCGCAGGCCTAACGAGGAGGAGCTGAGGATGAAGAGTGCGGACGATAATACCCCTGCTGTGGCAGAGCGTCCTGATGTCCAGGAGTCAGTGGGTCCCTTGGTGGCCCCCACGCCTCTCCGTCCGTGGCCCCAGATGACACTTCAGGTTTCTGAAGTTACAGTGACTGGCAAACCCCCAGAGGAAGGTGATGTCCCCAGAAGCAGTCCACCTGTGGCTTTCACAGAGGTCCCCCAGGCACCGGCCATCAGGATTCCCCTCTCTTCCTCCCTCTGTGGCCTGGGTGGCTCTCCCAGGGACCAGGCCTCGGGGCCCGATGCAAGTGAGGGGGCAGCTGGGCCTTTCCTGGAACCCAGCCAGCGACAGGTGGAGGCCACGTGGGAAGTATCCAGAGAGAATGGAAGGGGCCGAAAGGACCCCATAGTGGGAGCTATCATGGATGAGCCCCCCGGGGGTCTGGAGGTCGTGAGTGGGTTGGAGGAGCTGCTTGGCGAGGACACCATTGACCAGGAGCTGGAGCAGCTCTACCTGTCCCACCTGAGCCGCCTGCGGGCTGCCGTGGCTGCTGGTGGGGCAGGAGGTGGTGGGGAGGGCCCCACAGATGGGGGGGTATCTCCCAGCCATCCCCTGGGCATACTCACGGACCGCGACCTGATCTTGAAGTGGCCTGGCCCCGAGCGGGCCCTGAACAGTGCCCTGGCTGAGGAGATCACGCTGCACTATGCCAGGCTGGGGCGTGGTGTGGAGCTCATCAAGGACACCGAGGACCCTGATGAGGAGGGGGAGGGGGAAGAGGGGCTCTCCATCATACCCTCCAGCCCAGAAGGGGACACCCCCAAGGAATCGCCTCCGGAAATCCTCTCTGGGGCCCATCCTGTGGTAGCCACTATGGGAGATGTGTGGCTCCCATGGGCAGAAGGCTCAGGATGTAACAGCCCTGTGGTTCTGAGTATGGAGGGTCAGTTCACTGGGGCTCCAGAGAAGGGGGTGGGCAAGGACTCTGACTCTTTGCATGTGAATAGGGTGATAGCTGGGGTGACTGGGTCACCGGGGGGGACAGAAGTCCAGATGGAGTTTACCACTGAGTTGGCAGACAGATCGGTTTCTATATCTGGCAAGGAGCCAGCTGCTCCAGTCCTGCAGGGGCAAGATCTCCCCCTCCTTGGTCCCTTGGGGGCTGAAGGCTGTCCTTCCAGCCTGGCCAGGCCCCATGTGAGCTCCCAGGATGAAGAGGGTTCAGGCCCAAGCCTTGAGCCCCCAAAGAGGTCTCCTACCCTAGCAGCCCCTGCAGAGAGTGTGTGTGTATTGCCTCCCCAGCTCTGGGGGCCCTTGACCCAGACTCTGGGGGTCCTGGCTGGGCTGGTGGTGGTCCCTGTGGCTCTGAACAGTGGTATGTCCCTCCTGGTGCTTGCGCTGTGCCTCTCTCTGGCCTGGTTCTCGTAG

Related Sequences

bmy_16653T0 SequenceType object (3)

Length: 812 aa      View alignments
>bmy_16653T0
MARTAPVEPPLRHPAPPSPAAGEPRTSVEAAVAPRRVLFADEALGLPLAQLRRYRPWGGPGAGKMAVAAGQDGVGGGADEDDDGEDGDEGEEEEEACPEPSPLCPVPAGGGFYLVPTFSLPPAPGRLERLGRVMVELEALLPPPGAVPGGAGVWVPGGRPPVLRGLVRVLNRSFEKAVHVRASHDGWASFCDHPARYVPRSPPGAGAGGPGAGDPILDLGLGLGPGQAPTSSPDDGGRTDRFAFQLPFAEGAGDGARLDFVVRYETPEGTFWANNHGRNYTVLLRIAPVPTPTDAEGLPQQQQLQQLEPQPECQGPVEAEARQLKSCMKPVRRRPNEEELRMKSADDNTPAVAERPDVQESVGPLVAPTPLRPWPQMTLQVSEVTVTGKPPEEGDVPRSSPPVAFTEVPQAPAIRIPLSSSLCGLGGSPRDQASGPDASEGAAGPFLEPSQRQVEATWEVSRENGRGRKDPIVGAIMDEPPGGLEVVSGLEELLGEDTIDQELEQLYLSHLSRLRAAVAAGGAGGGGEGPTDGGVSPSHPLGILTDRDLILKWPGPERALNSALAEEITLHYARLGRGVELIKDTEDPDEEGEGEEGLSIIPSSPEGDTPKESPPEILSGAHPVVATMGDVWLPWAEGSGCNSPVVLSMEGQFTGAPEKGVGKDSDSLHVNRVIAGVTGSPGGTEVQMEFTTELADRSVSISGKEPAAPVLQGQDLPLLGPLGAEGCPSSLARPHVSSQDEEGSGPSLEPPKRSPTLAAPAESVCVLPPQLWGPLTQTLGVLAGLVVVPVALNSGMSLLVLALCLSLAWFS*