Part of scaffold_1357 (Scaffold)

For more information consult the page for scaffold_1357 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

APIP ENSTTRG00000001077 (Bottlenosed dolphin)

Gene Details

APAF1 interacting protein

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001013, Bottlenosed dolphin)

Protein Percentage 96.52%
cDNA percentage 97.1%
Ka/Ks Ratio 0.23059 (Ka = 0.0147, Ks = 0.0638)

APIP ENSBTAG00000018257 (Cow)

Gene Details

Probable methylthioribulose-1-phosphate dehydratase

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000024300, Cow)

Protein Percentage 92.61%
cDNA percentage 93.91%
Ka/Ks Ratio 0.2354 (Ka = 0.0334, Ks = 0.142)

APIP  (Minke Whale)

Gene Details

APAF1 interacting protein

External Links

Gene match (Identifier: BACU018436, Minke Whale)

Protein Percentage 97.64%
cDNA percentage 98.43%
Ka/Ks Ratio 0.23956 (Ka = 0.0084, Ks = 0.0351)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1062 bp    Location:381224..335929   Strand:-
>bmy_16662
ATGTCTGGCTGTCACGCTCCGGAGGGAGACTGTTGCTCACTGCAGTGTCGCGCGCAGGACAAGGAACATCCAAAATACCTGATCCCAGAGCTCTGCAAACAGTTTTACCATTTGGGCTGGGTCACTGGGACTGGAGGAGGAATTAGCTTGAAGCATGGCAATGAAATCTACATTGCTCCTTCAGGAGTGCAAAAGGAACGGATTCAGGACATAAGTGGACCTCCGCCATATAAGAATCTTAAAAGAAGCCAGTGTACTCCTCTTTTCATGAATGCTTACACAATGAGAGGAGCAGGTGCTGTGATTCATACCCACTCTAAAGCTGCTGTCATGGCCACCCTTCTCTTCCCAGGAAGGGAGTTTAAAATTACACATCAAGAGATGATCAAAGGAATAAAGAAATGTACCTCGGGAGGGTATTACAGATACGATGATATGTTAGTAGTACCCATTATTGAGAATACACCTGAGGAGAAAGACCTCAAAGAGCGAATGGCCCRAGCAATGAATGATTACCCAGACTCCTGTGCAGTACTAGTCAGACGGCACGGAGTCTACGTCTGGGGAGAGACGTGGGAGAAGGCTAAAAGCATGTGTGAGTGTTATGACTATTTGTTTGATGTTGCCGTATCAATGAAGAAGGTAGGACTGGATCCTACACAGCTTCCCGTTGGAGAAAATGGAATTCTCTCTTTTGTGAGAAGCAACTCAAAATACTATAGTTCCCCAGAGAATGTCCCAAGCAATCAGAACGAAAGCAAAATTGAATTCTTACTTCCAGTGATTTCCCTTCCCAGCCAAGAATTCCTATTAAAACCTTGCTGTGTTATCATATTAAAAATATTTCTTTTGCATATCGAATTTACCAAGTTTTTCTTTCGTGGTTTTGAATGGCATTTAAAGGACAAACGTGTTCTGTTCTGCAGCCCTGGAATTCACTATTCATGGTTAAGTCATTACCTCACCAGAGCATTACGCATTACAGATAGTTCCAGAGAGGACGAGATCAATGATGAACTTTTGTCGTGCCCTCTGGTTCACATCAGGGTGAAAGCCCAATAG

Related Sequences

bmy_16662T0 Protein

Length: 354 aa      View alignments
>bmy_16662T0
MSGCHAPEGDCCSLQCRAQDKEHPKYLIPELCKQFYHLGWVTGTGGGISLKHGNEIYIAPSGVQKERIQDISGPPPYKNLKRSQCTPLFMNAYTMRGAGAVIHTHSKAAVMATLLFPGREFKITHQEMIKGIKKCTSGGYYRYDDMLVVPIIENTPEEKDLKERMAXAMNDYPDSCAVLVRRHGVYVWGETWEKAKSMCECYDYLFDVAVSMKKVGLDPTQLPVGENGILSFVRSNSKYYSSPENVPSNQNESKIEFLLPVISLPSQEFLLKPCCVIILKIFLLHIEFTKFFFRGFEWHLKDKRVLFCSPGIHYSWLSHYLTRALRITDSSREDEINDELLSCPLVHIRVKAQ*