Sequence detailsbmy_16682 (Coding sequence)

Part of scaffold_1353 (SequenceType object (1))

For more information consult the page for scaffold_1353 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TOR1AIP1ENSTTRG00000014500 (Bottlenosed dolphin)

Gene Details

torsin A interacting protein 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013747, Bottlenosed dolphin)

Protein Percentage 93.9%
cDNA percentage 96.12%
Ka/Ks Ratio 0.49461 (Ka = 0.0266, Ks = 0.0538)

TOR1AIP1ENSBTAG00000035226 (Cow)

Gene Details

Torsin-1A-interacting protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000033870, Cow)

Protein Percentage 87.74%
cDNA percentage 90.99%
Ka/Ks Ratio 0.405 (Ka = 0.0694, Ks = 0.1713)

TOR1AIP1 (Minke Whale)

Gene Details

torsin A interacting protein 1

External Links

Gene match (Identifier: BACU012844, Minke Whale)

Protein Percentage 97.64%
cDNA percentage 98.9%
Ka/Ks Ratio 0.96291 (Ka = 0.0111, Ks = 0.0115)

Additional orthologs identified in other species via the OPTIC pipeline.

TOR1AIP1 (Human)   Tor1aip1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1083 bp    Location:353144..337312   Strand:-
Raw sequence 
>bmy_16682
GAAACGGAGGAAGATGATCAAGACAGCTCTGACAGTGATGTTACGGTTGTTAAGGTCAGATCCGGGGATTCTGTTGAGTCTGGAGGTCGAGACTTCACAGCTTTTGATAAACAACCATTAGTGCTAAGCTCGGGATATCAAAAAAATCCTCAGGAATGGGTTGAACAAACCACGAGAATAAGGACTAGGATGCAAACGTCATCACCAGGCAAGCGTTCGATATATGGCAGTTTTTCAGATGATGATGGTGTTCAGAAATCAGAGCTTGGAAACCAATCTCCATCAACCTCCAGCCAACAAGTGACTGGACAACCCAAAAGTGCATCTTTTGTCAAGGTGAAGTGGTGCACCCTTGTCCTGATGGCTGCTGTYCTCATTGGGTGTTTTTGGTACACTCATACTCGTGAAGCAGAAACCGCTGCTGTTCAAGAGTTCCAGAACCAGATGAAGCAACTTATGAATAAGTACCAAGGTCAAGATGAGAAGCTGTGGAAAAGGAGCCTGACATTCCTGGAAAAACATCTTAATAGCTCCCACCCTCGGCCTCAGCCTGCTATCTTGCTGCTCACTGCTGCCCGAGATGCTGAAGAAGCACTCAAGTGTCTGAGTGAACAAATTGCTGATGCCTATTCTTCCTTCCGAAGTGTTCCTGCAATCCGGATTGATGGGGCGGGCAAAGCAACTCAAGACAGTGATGTTGTCAAACGAGAGGTAGATCAGGAACTGAGCAACGGATTCCGAAATGGCCAGAATGCAGCTGTGGTCCACCGCTTTGAGTCACTGCCTGCAGGCTCTACTTTGATCTTCTATAAGTATTGTGACCATGAAAATGCAGCCTTCAAAGATGTAGCCTTAGTCCTAACTGTCTTGTTAGAGGAGGAGACACTTGGAACCAGTCTAGGCCTAAAGGAAATTGAAGAAAAAGTGAGGGATTTCCTCAAAGTCAAGTTCACCAACTCTGACACACCCAACTCCTACAAACATATGGACCCAGACAAATTGAGTGGGCTCTGGAGCCGTATTTCTCACTTAGTCCTGCCTGTACAACCTGAAAATGACCTGAAAAGGGGCATCTGCTTATAA

Related Sequences

bmy_16682T0 SequenceType object (3)

Length: 361 aa      View alignments
>bmy_16682T0
ETEEDDQDSSDSDVTVVKVRSGDSVESGGRDFTAFDKQPLVLSSGYQKNPQEWVEQTTRIRTRMQTSSPGKRSIYGSFSDDDGVQKSELGNQSPSTSSQQVTGQPKSASFVKVKWCTLVLMAAVLIGCFWYTHTREAETAAVQEFQNQMKQLMNKYQGQDEKLWKRSLTFLEKHLNSSHPRPQPAILLLTAARDAEEALKCLSEQIADAYSSFRSVPAIRIDGAGKATQDSDVVKREVDQELSNGFRNGQNAAVVHRFESLPAGSTLIFYKYCDHENAAFKDVALVLTVLLEEETLGTSLGLKEIEEKVRDFLKVKFTNSDTPNSYKHMDPDKLSGLWSRISHLVLPVQPENDLKRGICL*