Part of scaffold_1374 (Scaffold)

For more information consult the page for scaffold_1374 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NGF ENSTTRG00000011131 (Bottlenosed dolphin)

Gene Details

nerve growth factor (beta polypeptide)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010551, Bottlenosed dolphin)

Protein Percentage 98.34%
cDNA percentage 98.48%
Ka/Ks Ratio 0.12696 (Ka = 0.0069, Ks = 0.0544)

NGF ENSBTAG00000007446 (Cow)

Gene Details

Beta-nerve growth factor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009796, Cow)

Protein Percentage 90.87%
cDNA percentage 92.53%
Ka/Ks Ratio 0.15854 (Ka = 0.0418, Ks = 0.2638)

NGF  (Minke Whale)

Gene Details

nerve growth factor (beta polypeptide)

External Links

Gene match (Identifier: BACU002679, Minke Whale)

Protein Percentage 93.39%
cDNA percentage 93.64%
Ka/Ks Ratio 0.35679 (Ka = 0.0368, Ks = 0.1032)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 885 bp    Location:212169..219714   Strand:+
>bmy_16688
ATGCCAGCTCTCTCCTCCCACAGAGTCCTGGCCCGGGGTCGTGCAGTCCAAGGGGCTGGATGGCATGCTGGACCCAAGCTCAGCTCAGCGTCTGGGCCCAATAACAGCTTTTCCGAGGGAGCAGCTTTCTGTCCTGGCCACACTGAGGTGCACAGCGTAATGTCCATGTTGTTCTACACTCTGATCACAGCTCTTTGGATCGGCGTCCAGGCAAAAGCGCACACCCAGAGCAATGTCCCAGCAGGACACGCCATCCCCCAAGCCCACTGGACTAACCTTCAGCACTCCCTTGACACAGCCCTCCGCAGAGCCCACAGCGGCCCGGCAGCGGCGATAGCCGCCAGGGTGGCAGGGCAGACCCGCAAGATCACCGTGGACCCCAAACTTTTTAAAAAGCGGCGCCTGCGTTCACCCCGCGTGCTGTTTAGCACCCAACCCCCACCTGTGGCCGCGGACGCTCAGGATCTGGACTTGGAGGCCGGCGGGGCCGCCCCCTTCAACAGGACTCACAGGAGCAAGCGGTCGTCGTCCCACCCTGTCTTCCACCGGGGGGAGTTCTCGGTGTGCGACAGCGTCAGCGTGTGGGTGGGGGACAAGGCCACCGCCACGGACATCAAGGGCAAGGAGGTGATGGTGTTGGGAGAGGTGAACATCAACAACAGTGTATTCAAACAGTACTTTTTTGAGACCAAGTGCCGGGACCCCAATCCCGTCGACAGCGGATGCCGGGGCATCGACTCGAAGCACTGGAACTCATATTGTACCACAACCCACACCTTCGTCAAGGCGCTGACCATGGATGGCAAGCAGGCTGCCTGGCGGTTCATCCGGATCGACACGGCCTGCGTGTGTGTGCTCAGCAGGAAAGCTGGGAGGAGAGCCTGA

Related Sequences

bmy_16688T0 Protein

Length: 295 aa      View alignments
>bmy_16688T0
MPALSSHRVLARGRAVQGAGWHAGPKLSSASGPNNSFSEGAAFCPGHTEVHSVMSMLFYTLITALWIGVQAKAHTQSNVPAGHAIPQAHWTNLQHSLDTALRRAHSGPAAAIAARVAGQTRKITVDPKLFKKRRLRSPRVLFSTQPPPVAADAQDLDLEAGGAAPFNRTHRSKRSSSHPVFHRGEFSVCDSVSVWVGDKATATDIKGKEVMVLGEVNINNSVFKQYFFETKCRDPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDGKQAAWRFIRIDTACVCVLSRKAGRRA*