Part of scaffold_1374 (Scaffold)

For more information consult the page for scaffold_1374 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TSPAN2 ENSTTRG00000009727 (Bottlenosed dolphin)

Gene Details

tetraspanin 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009213, Bottlenosed dolphin)

Protein Percentage 90.83%
cDNA percentage 92.2%
Ka/Ks Ratio 0.39048 (Ka = 0.0599, Ks = 0.1534)

TSPAN2 ENSBTAG00000015961 (Cow)

Gene Details

tetraspanin-2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000021222, Cow)

Protein Percentage 83.18%
cDNA percentage 84.55%
Ka/Ks Ratio 0.37881 (Ka = 0.1274, Ks = 0.3363)

TSPAN2  (Minke Whale)

Gene Details

tetraspanin 2

External Links

Gene match (Identifier: BACU002680, Minke Whale)

Protein Percentage 91.24%
cDNA percentage 93.64%
Ka/Ks Ratio 0.62363 (Ka = 0.0587, Ks = 0.0942)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 684 bp    Location:429245..469441   Strand:+
>bmy_16689
ATGGGTCGCAGCCTTCTGGGCGCAGGGAAGCCGCATCCCACGCCTTCTTCTCCCAGTTCTTGCCTATTAAGGCTGTTTACCTTTCAGCTGGCAGGGTCGGCTGTCATTGCTTTTGGACTGTGGTTTCGGTTTGGAGGCACCATGAAGGATTTCTCATCGGAGGACAGTTCCCCAGAGTACTTCTACATGGGGCTCTATGTGCTGGTTGGAGCAGGGGCCCTGATGATGGCCGTGGGCTTCTTCGGGTGCTGTGGAGCCACGCGGGAGTCCCAGTGTGTTCTCGGATCTTTTTTTACCTGCCTATTGGTGATATTTGCTGCTGAAATAACCACTGGAGTATTTGCTTTTATAGGCAAGGATGTAGCTATACGACATGTTCAGACCATGTATGAAGAAGCTTATAATGATTACCTTAGAGACAGGGAAAAGGGAAATGGGACTCTCATCACCTTCCACTCAACATTTCAGTGCTGTGGAAAAGAAAGCTCTGAACAGGTCCAACCCACCTGCCCAAAGGAGCTCCTAGGACACAAGAATTGCATTGATGAAATTGAGAGCGTAATCAGTGTTAAGCTCCAGCTCATCGGAATTGTCGGTATTGGAATCGCAGGTCTCACGATCTTTGGCATGATATTCAGCATGGTCCTTTGCTGTGCGATACGAAATTCACGAGATGTCATATGA

Related Sequences

bmy_16689T0 Protein

Length: 228 aa      View alignments
>bmy_16689T0
MGRSLLGAGKPHPTPSSPSSCLLRLFTFQLAGSAVIAFGLWFRFGGTMKDFSSEDSSPEYFYMGLYVLVGAGALMMAVGFFGCCGATRESQCVLGSFFTCLLVIFAAEITTGVFAFIGKDVAIRHVQTMYEEAYNDYLRDREKGNGTLITFHSTFQCCGKESSEQVQPTCPKELLGHKNCIDEIESVISVKLQLIGIVGIGIAGLTIFGMIFSMVLCCAIRNSRDVI*