Sequence detailsbmy_16696 (Coding sequence)

Part of scaffold_1393 (SequenceType object (1))

For more information consult the page for scaffold_1393 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CNPENSTTRG00000006607 (Bottlenosed dolphin)

Gene Details

2',3'-cyclic nucleotide 3' phosphodiesterase

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000006253, Bottlenosed dolphin)

Protein Percentage 96.43%
cDNA percentage 97.46%
Ka/Ks Ratio 0.17155 (Ka = 0.0139, Ks = 0.0809)

CNPENSBTAG00000025762 (Cow)

Gene Details

2',3'-cyclic-nucleotide 3'-phosphodiesterase

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000036278, Cow)

Protein Percentage 93.0%
cDNA percentage 92.67%
Ka/Ks Ratio 0.07669 (Ka = 0.0288, Ks = 0.3758)

Additional orthologs identified in other species via the OPTIC pipeline.

CNP (Human)   Cnp (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1368 bp    Location:105932..99933   Strand:-
Raw sequence 
>bmy_16696
AGGCGGCCGCCAGTAGGGTCGCGTCACCGCTACACTCCGTGTCCCTCCGCGCAGGCGGGCGGCCCCGGAGAGCTGGTGCTGAGACGGCGGCGCCCCCTCCTCATCATGAATAGAGGCTTCTCCCGAAAGAGCCAAACGTTCCTGCCCAAGATCTTCTTCCGCAAAATGTCATCCTCAGGGGCCAAGGACAAGCCAGAGCTGCAGTTTCCCTTCCTGCAGGACGAGGAGACRGTGGCCACACTGCAGGAATGCAAGACGCTCTTCATCCTGCGCGGCCTGCCCGGGAGCGGCAAGTCCACGCTGGCCCGGGTCATCGTGGACAGGTACCGGGATGGCACCAAGATGGTGTCCGCCGACACCTACAAGATCACCCCCGGTGCCCGGGGGGCCTTCACCGATGAGTACAAGCAGCTGGACGAGGACCTGGCTGCTTACTGCCGCCGGGACGTCCGGGTCCTCGTGCTGGATGACACCAACCACGAGCGGGAGCGGCTGGAACAACTCTTTGAGATGGCCGACCAGTACCAGTACCAGGTGGTGCTGGTGGAGCCCAAGACGGCGTGGCGGCTGGACTGTGCCCAGCTCAAGGAGAAGAACCAGTGGCAGCTGTCGGCCGACGATCTGAAGAAGCTGAAGCCTGGGCTGGAGAAGGACTTCCTGCCGCTCTACTTCGGCTGGTTCCTGACCAAGAAGAGTTCCGAGGGCCTCCGCAAAGCCGGCCAGGCCTTCCTCGAGGAGCTGGGCAACCACAAGGCCTTCAAGAGGGAGCTGCGACACTTTGTCTCTGGGGATGAGCCCAGGGAGAAGATTGAACTGGTCACCTACTTTGGGAAGAGACCCCCGGGCGTGCTGCACTGCACAACCAAGTTCTGTGACTATGGGAAGGCCGCTGGGGCAGACGAGTACGCCCAGCAGGATGTGGTGAAGAAATCCTACTGCAAGGCCTTCACGCTGACCATCTCTGCCCTCTTTGTGACACCCAAGACGACAGGAGCCCGGGTAGAGCTGAGCGAGCAGGAGCTGGCCTTGTGGCCGAACGACGTGGACAAGCTGTCCCCCTCTGACAGCCTGTCACGGGGCAGCCGCGCACACATCACCCTGGGCTGCGYGGGTGACGTGGAGGCCGTGCAGACGGGTGTTGACCTGCTAGAGATTGTGAAGCAGGAGAAGGGGGGTAACCGTGGCGAGGAGGTGGGTGAGCTCAGCCGGGGCAAGCTCTACTCCTTGGGCAGTGGGCGCTGGATGCTGAACCTGGCCAAGAAGATGGAGGTCAGGGCCATCTTCACGGGGTACTACGGGAAGGGCAAGGCCGTGCCCACACAGGGCGGCCGCAAGGGTGGCGCCTTTCAGTCCTGCACCATCATCTGA

Related Sequences

bmy_16696T0 SequenceType object (3)

Length: 456 aa      View alignments
>bmy_16696T0
RRPPVGSRHRYTPCPSAQAGGPGELVLRRRRPLLIMNRGFSRKSQTFLPKIFFRKMSSSGAKDKPELQFPFLQDEETVATLQECKTLFILRGLPGSGKSTLARVIVDRYRDGTKMVSADTYKITPGARGAFTDEYKQLDEDLAAYCRRDVRVLVLDDTNHERERLEQLFEMADQYQYQVVLVEPKTAWRLDCAQLKEKNQWQLSADDLKKLKPGLEKDFLPLYFGWFLTKKSSEGLRKAGQAFLEELGNHKAFKRELRHFVSGDEPREKIELVTYFGKRPPGVLHCTTKFCDYGKAAGADEYAQQDVVKKSYCKAFTLTISALFVTPKTTGARVELSEQELALWPNDVDKLSPSDSLSRGSRAHITLGCXGDVEAVQTGVDLLEIVKQEKGGNRGEEVGELSRGKLYSLGSGRWMLNLAKKMEVRAIFTGYYGKGKAVPTQGGRKGGAFQSCTII*