Sequence details bmy_16705 (Coding sequence)

Part of scaffold_1393 (Scaffold)

For more information consult the page for scaffold_1393 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

JUP ENSTTRG00000006595 (Bottlenosed dolphin)

Gene Details

junction plakoglobin

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006241, Bottlenosed dolphin)

Protein Percentage 96.84%
cDNA percentage 97.25%
Ka/Ks Ratio 0.11737 (Ka = 0.0134, Ks = 0.1141)

JUP ENSBTAG00000017685 (Cow)

Gene Details

Junction plakoglobin

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000023522, Cow)

Protein Percentage 96.15%
cDNA percentage 93.63%
Ka/Ks Ratio 0.04046 (Ka = 0.0166, Ks = 0.4113)

Additional orthologs identified in other species via the OPTIC pipeline.

JUP (Human)  

Genome Location

Sequence Coding sequence

Length: 2184 bp    Location:246074..265830   Strand:+
Raw sequence 
>bmy_16705
ATGGACGTGATGAACCTCATCGAACAACCCATCAAGGTGACCGAGTGGCAACAGACGTACACCTACGACTCGGGCATCCACTCGGGGGTCAATACCTGCGTGCCCTCGGTCAGCAGCAAAGGCGTCGCGGAGGAGGAAGAGGCCTGTGGGCGCCAGTACATGCTCAAGAAGACCACCACCTACACCCAGGCGGTGCCCCAGGGCCAAGGTGACGTGGATTACCAGATGTCCACGACAGCCAGAGCCAAGCGGGTGCGGGAGGCCATGTGTCCTGGTGTGACAGGAGAGGACAGCTCCCTGCTGGCCACCCAGGTGGAGGGACAGACCACCAACCTGCAGCGGCTGGCCGAGCCATCCCAGCTTCTGAAGTCGGCCATCGTGCATCTCATCAACTACCAGGACGATGCCGAGCTGGCCACCCGGGCCCTTCCTGAGCTCACCAAACTGCTCAACGATGAGGACCCGGTGGTGGTGACCAAGGCGGCCATGATCGTGAACCAGCTGTCGAAGAAGGAGGCGTCTCGGCGGGCACTGATGGGCTCGCCCCAGCTGGTAGCAGCCGTTGTGCGCACCATGCAGAACACCAGCGACCTGGACACAGCCCGCTGTACCACCAGCATCCTTCACAACCTCTCCCACCACCGCGAGGGGCTGCTTGCCATCTTCAAGTCGGGCGGCATCCCTGCCCTGGTCCGCATGCTCAGCTCCCCCGTGGAGTCGGTCCTCTTCTATGCCATCACCACGCTGCACAACCTGCTGCTCTACCAGGAGGGCGCCAAGATGGCGGTGCGCCTGGCGGACGGGCTGCAGAAGATGGTGCCCCTGCTCAACAAGAACAACCCCAAGTTCCTGGCCATCACCACCGACTGCCTGCAGCTCCTGGCCTACGGCAACCAGGAGAGCAAGCTCATCATCCTGGCCAATGGAGGACCCCAGGCTCTCGTGCACATCATGCGCAACTACAGTTACGAGAAGCTGCTCTGGACCACCAGCCGTGTGCTCAAGGTGCTGTCCGTGTGTCCCAGCAATAAGCCCGCTATTGTGGAGGCTGGTGGGATGCAGGCCCTGGGCAGACACCTGACGAGCAACAGCCCCCGCCTCGTGCAGAACTGCCTCTGGACCCTGCGCAACCTCTCGGACGTGGCCACCAAGCAGGAGGGCCTGGAGAGTGTGCTGAAGATTCTGGTGAACCAGCTGAGCGTGGAAGACGTCAATGTCCTCACCTGTGCCACGGGCACTCTGTCCAACCTGACCTGCAACAACAGCAAGAACAAGACGCTGGTGACGCAGAACAGCGGCGTGGAGGCGCTCATCCATGCCATCCTGTGCGCGGGTGACAAGGATGACATCACAGAGCCCGCCATCTGTGCCCTGCGCCACCTCACCAGCCGCCACCCCGAGGCCGAGATGGCTCAGAACTCCGTGCGCCTCAACTACGGCATCCCGGCCATCGTCAAGCTGCTCAACCAGCCCAACCAGTGGCCACTGGTCAAGGCAACCATTGGCCTGATCAGGAATCTGGCCCTGTGCCCAGCCAACCATGCCCCACTGCAGGAGGCAGCGGTCATTCCCCGCCTCGTCCAGCTGCTGGTCAAGGCCCACCAGGATGCCCAGCGCCACATGGCTGCAGGCACACAGCAGCCCTTCACGGATGGCGTGAGGATGGAGGAGATCGTGGAAGGCTGCACCGGGGCCCTGCACATCCTCGCCCGGGATCCCATGAACCGCATGGAGATCTTCCGACTCAACACCATCCCCCTGTTTGTGCAGCTCCTGTACTCCTCAGTGGAGAACATCCAGCGTGTGGCCGCTGGGGTGCTGTGCGAGCTGGCCCAGGACAAGGAGGCGGCCGACACCATTGATGCTGAGGGGGCCTCAGCCCCACTCATGGAGCTACTGCACTCCCACAATGAGGGCACCGCCACCTACGCTGCTGCCGTCTTGTTCCGCATCTCCGAGGACAAGAACCCAGATTACCGTAAGCGTGTGTCTGCCCAGAGCATGATCCCCATTAATGAACCCTACGCAGATGACATGGATGCCACCTACCGCCCCATGTACTCGAGTGACATGCTCCTGGACCCCCTGGAGATGCACATGGACATGGACGGGGACTACCCCATTGACACCTACAGCGACGGCTTCAGGCCCGCCTACCCCACTGCGGACCACATGCTGGCCTAG

Related Sequences

bmy_16705T0 Protein

Length: 728 aa      View alignments
>bmy_16705T0
MDVMNLIEQPIKVTEWQQTYTYDSGIHSGVNTCVPSVSSKGVAEEEEACGRQYMLKKTTTYTQAVPQGQGDVDYQMSTTARAKRVREAMCPGVTGEDSSLLATQVEGQTTNLQRLAEPSQLLKSAIVHLINYQDDAELATRALPELTKLLNDEDPVVVTKAAMIVNQLSKKEASRRALMGSPQLVAAVVRTMQNTSDLDTARCTTSILHNLSHHREGLLAIFKSGGIPALVRMLSSPVESVLFYAITTLHNLLLYQEGAKMAVRLADGLQKMVPLLNKNNPKFLAITTDCLQLLAYGNQESKLIILANGGPQALVHIMRNYSYEKLLWTTSRVLKVLSVCPSNKPAIVEAGGMQALGRHLTSNSPRLVQNCLWTLRNLSDVATKQEGLESVLKILVNQLSVEDVNVLTCATGTLSNLTCNNSKNKTLVTQNSGVEALIHAILCAGDKDDITEPAICALRHLTSRHPEAEMAQNSVRLNYGIPAIVKLLNQPNQWPLVKATIGLIRNLALCPANHAPLQEAAVIPRLVQLLVKAHQDAQRHMAAGTQQPFTDGVRMEEIVEGCTGALHILARDPMNRMEIFRLNTIPLFVQLLYSSVENIQRVAAGVLCELAQDKEAADTIDAEGASAPLMELLHSHNEGTATYAAAVLFRISEDKNPDYRKRVSAQSMIPINEPYADDMDATYRPMYSSDMLLDPLEMHMDMDGDYPIDTYSDGFRPAYPTADHMLA*