Sequence detailsbmy_16705 (Coding sequence)

Part of scaffold_1393 (SequenceType object (1))

For more information consult the page for scaffold_1393 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

JUPENSTTRG00000006595 (Bottlenosed dolphin)

Gene Details

junction plakoglobin

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000006241, Bottlenosed dolphin)

Protein Percentage 96.84%
cDNA percentage 97.25%
Ka/Ks Ratio 0.11737 (Ka = 0.0134, Ks = 0.1141)

JUPENSBTAG00000017685 (Cow)

Gene Details

Junction plakoglobin

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000023522, Cow)

Protein Percentage 96.15%
cDNA percentage 93.63%
Ka/Ks Ratio 0.04046 (Ka = 0.0166, Ks = 0.4113)

Additional orthologs identified in other species via the OPTIC pipeline.

JUP (Human)  

Genome Location

Sequence SequenceType object (2)

Length: 2184 bp    Location:246074..265830   Strand:+
Raw sequence 
>bmy_16705
ATGGACGTGATGAACCTCATCGAACAACCCATCAAGGTGACCGAGTGGCAACAGACGTACACCTACGACTCGGGCATCCACTCGGGGGTCAATACCTGCGTGCCCTCGGTCAGCAGCAAAGGCGTCGCGGAGGAGGAAGAGGCCTGTGGGCGCCAGTACATGCTCAAGAAGACCACCACCTACACCCAGGCGGTGCCCCAGGGCCAAGGTGACGTGGATTACCAGATGTCCACGACAGCCAGAGCCAAGCGGGTGCGGGAGGCCATGTGTCCTGGTGTGACAGGAGAGGACAGCTCCCTGCTGGCCACCCAGGTGGAGGGACAGACCACCAACCTGCAGCGGCTGGCCGAGCCATCCCAGCTTCTGAAGTCGGCCATCGTGCATCTCATCAACTACCAGGACGATGCCGAGCTGGCCACCCGGGCCCTTCCTGAGCTCACCAAACTGCTCAACGATGAGGACCCGGTGGTGGTGACCAAGGCGGCCATGATCGTGAACCAGCTGTCGAAGAAGGAGGCGTCTCGGCGGGCACTGATGGGCTCGCCCCAGCTGGTAGCAGCCGTTGTGCGCACCATGCAGAACACCAGCGACCTGGACACAGCCCGCTGTACCACCAGCATCCTTCACAACCTCTCCCACCACCGCGAGGGGCTGCTTGCCATCTTCAAGTCGGGCGGCATCCCTGCCCTGGTCCGCATGCTCAGCTCCCCCGTGGAGTCGGTCCTCTTCTATGCCATCACCACGCTGCACAACCTGCTGCTCTACCAGGAGGGCGCCAAGATGGCGGTGCGCCTGGCGGACGGGCTGCAGAAGATGGTGCCCCTGCTCAACAAGAACAACCCCAAGTTCCTGGCCATCACCACCGACTGCCTGCAGCTCCTGGCCTACGGCAACCAGGAGAGCAAGCTCATCATCCTGGCCAATGGAGGACCCCAGGCTCTCGTGCACATCATGCGCAACTACAGTTACGAGAAGCTGCTCTGGACCACCAGCCGTGTGCTCAAGGTGCTGTCCGTGTGTCCCAGCAATAAGCCCGCTATTGTGGAGGCTGGTGGGATGCAGGCCCTGGGCAGACACCTGACGAGCAACAGCCCCCGCCTCGTGCAGAACTGCCTCTGGACCCTGCGCAACCTCTCGGACGTGGCCACCAAGCAGGAGGGCCTGGAGAGTGTGCTGAAGATTCTGGTGAACCAGCTGAGCGTGGAAGACGTCAATGTCCTCACCTGTGCCACGGGCACTCTGTCCAACCTGACCTGCAACAACAGCAAGAACAAGACGCTGGTGACGCAGAACAGCGGCGTGGAGGCGCTCATCCATGCCATCCTGTGCGCGGGTGACAAGGATGACATCACAGAGCCCGCCATCTGTGCCCTGCGCCACCTCACCAGCCGCCACCCCGAGGCCGAGATGGCTCAGAACTCCGTGCGCCTCAACTACGGCATCCCGGCCATCGTCAAGCTGCTCAACCAGCCCAACCAGTGGCCACTGGTCAAGGCAACCATTGGCCTGATCAGGAATCTGGCCCTGTGCCCAGCCAACCATGCCCCACTGCAGGAGGCAGCGGTCATTCCCCGCCTCGTCCAGCTGCTGGTCAAGGCCCACCAGGATGCCCAGCGCCACATGGCTGCAGGCACACAGCAGCCCTTCACGGATGGCGTGAGGATGGAGGAGATCGTGGAAGGCTGCACCGGGGCCCTGCACATCCTCGCCCGGGATCCCATGAACCGCATGGAGATCTTCCGACTCAACACCATCCCCCTGTTTGTGCAGCTCCTGTACTCCTCAGTGGAGAACATCCAGCGTGTGGCCGCTGGGGTGCTGTGCGAGCTGGCCCAGGACAAGGAGGCGGCCGACACCATTGATGCTGAGGGGGCCTCAGCCCCACTCATGGAGCTACTGCACTCCCACAATGAGGGCACCGCCACCTACGCTGCTGCCGTCTTGTTCCGCATCTCCGAGGACAAGAACCCAGATTACCGTAAGCGTGTGTCTGCCCAGAGCATGATCCCCATTAATGAACCCTACGCAGATGACATGGATGCCACCTACCGCCCCATGTACTCGAGTGACATGCTCCTGGACCCCCTGGAGATGCACATGGACATGGACGGGGACTACCCCATTGACACCTACAGCGACGGCTTCAGGCCCGCCTACCCCACTGCGGACCACATGCTGGCCTAG

Related Sequences

bmy_16705T0 SequenceType object (3)

Length: 728 aa      View alignments
>bmy_16705T0
MDVMNLIEQPIKVTEWQQTYTYDSGIHSGVNTCVPSVSSKGVAEEEEACGRQYMLKKTTTYTQAVPQGQGDVDYQMSTTARAKRVREAMCPGVTGEDSSLLATQVEGQTTNLQRLAEPSQLLKSAIVHLINYQDDAELATRALPELTKLLNDEDPVVVTKAAMIVNQLSKKEASRRALMGSPQLVAAVVRTMQNTSDLDTARCTTSILHNLSHHREGLLAIFKSGGIPALVRMLSSPVESVLFYAITTLHNLLLYQEGAKMAVRLADGLQKMVPLLNKNNPKFLAITTDCLQLLAYGNQESKLIILANGGPQALVHIMRNYSYEKLLWTTSRVLKVLSVCPSNKPAIVEAGGMQALGRHLTSNSPRLVQNCLWTLRNLSDVATKQEGLESVLKILVNQLSVEDVNVLTCATGTLSNLTCNNSKNKTLVTQNSGVEALIHAILCAGDKDDITEPAICALRHLTSRHPEAEMAQNSVRLNYGIPAIVKLLNQPNQWPLVKATIGLIRNLALCPANHAPLQEAAVIPRLVQLLVKAHQDAQRHMAAGTQQPFTDGVRMEEIVEGCTGALHILARDPMNRMEIFRLNTIPLFVQLLYSSVENIQRVAAGVLCELAQDKEAADTIDAEGASAPLMELLHSHNEGTATYAAAVLFRISEDKNPDYRKRVSAQSMIPINEPYADDMDATYRPMYSSDMLLDPLEMHMDMDGDYPIDTYSDGFRPAYPTADHMLA*