Part of scaffold_1391 (SequenceType object (1))

For more information consult the page for scaffold_1391 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SGPL1ENSTTRG00000007575 (Bottlenosed dolphin)

Gene Details

sphingosine-1-phosphate lyase 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000007164, Bottlenosed dolphin)

Protein Percentage 96.7%
cDNA percentage 97.04%
Ka/Ks Ratio 0.37255 (Ka = 0.0216, Ks = 0.0579)

SGPL1ENSBTAG00000009984 (Cow)

Gene Details

sphingosine-1-phosphate lyase 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000044620, Cow)

Protein Percentage 93.88%
cDNA percentage 91.19%
Ka/Ks Ratio 0.14383 (Ka = 0.0406, Ks = 0.2823)

SGPL1 (Minke Whale)

Gene Details

sphingosine-1-phosphate lyase 1

External Links

Gene match (Identifier: BACU001928, Minke Whale)

Protein Percentage 98.36%
cDNA percentage 98.18%
Ka/Ks Ratio 0.38586 (Ka = 0.0138, Ks = 0.0357)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 1698 bp    Location:35711..1935   Strand:-
>bmy_16719
ATGCTTGATGAGAATTTAATGGGGGAGATTAATTCTCATGAGTTGGGTATTCTGAAGGCCTTTGAGCCCTACTTCGAGATTTTGGAAGTGTATTCCACAAAGGCCAAGAATTATGTAAACGGGCATTGCACCAAGTATGAGCCCTGGCAGCTAATTGCATGGAGTGTCGTGTGGACTCTGCTGATAGTCTGGGTATACGAGTTTGTCTTCCAGCCAGAGAGTTTATGGTCAAGGTTTAAAAAGAGATGTTTTAAGCTYATCCGGAAGATGCCTATTATTGGTCGTAAGATCCAAGATAAGTTGAACAAGACCAAGGAAGATATTAGCAAGAATATGTCATTCCTGAAAGTGGACAAAGATTACGTGAAAGCCCTGCCCTCTCAAGGAATGAGCCCGGCTGCAGTTCTGGAGAAGCTCAAAGAATACAGCTCTATGGATGTCTTGTGGCAAGAAGGGAAAGCCTCCGGAGCGGTGTACAGTGGGGAGAAGGAGCTCACTGAACTCCTTGTGAAGGCTTATGGAGATTTTGCATGGAGTAATCCGCTGCATCCAGATATCTTCCCAGGACTACGTAAGATAGAAGCAGAGATTGTGAGGATGGCTTGTTCCCTATTCAGTGGGGGACCAGATTCCTGTGGATGTGTGACCTCCGGGGGGACAGAAAGTATTCTGATGGCCTGTTCCCTCCTTGTACATGTAGCCCCCCAGAGTGCCCATGCTGCATTTGACAAAGCAGCCAACTATTTTGGGATGAAGATTAAACGGGTTCCACTGAACAAAGTGATGGAGGTGGATGTTCGGGCAATGGAAAGAGCCATCTCCAGGAACACTGCCATGCTCGTCTGTTCTGCCCCCCAGTTTCCTCACGGTGTGATAGATCCTGTCCCTGATGTGGCCAAGCTGGCTGTCAAATACAAAATACCTCTTCATGTGGACGCTTGTCTGGGGGGCTTCCTCATCGTCTTTATGGAGAAAGCCGGATACCCACTGGAGCAACCATTCGATTTCCGGGTGAAAGGTGTGACCAGCATTTCAGCTGATACTCATAAGTACGGCTACGCCCCCAAGGGCTCTTCAGTGGTGTTGTACTCTGACAAGAAGTACAGGCACTATCAGTTCTTCGTTGACACAGATTGGCAGGGCGGCATCTACGCTTCCCCAACCATCGCGGGCTCACGGCCTGGTGGCATCAGTGCAGCCTGTTGGGCCGCCCTGATGTACTTCGGTGAGAGCGGCTACGTTGAAGCTACCAAGCAGATCATCAAAACCACTCGCTTCCTCAAGTCCGAACTGGAAAATATCAAAGGCATCTTTGTTTTTGGGAATCCTCAATTGTCAGTCATTGCTCTGGGCTCCCATGATTTTGACATCTACCGACTATTCAACCTGATGAATGCCAAGGGCTGGAGCTTGAACCAGTTGCAGTTCCCACCCAGCATACATTTCTGCATCACGTTGGTACACACCCGTAAGCGAGTAGCGATACAGTTCCTAAAGGACATCCGGGAATCTGTCACTCAAATCATGAAGAATCCGAAAGCAAAGACCACAGGAATGGGTGCGATCTACGGCATGGCCCAGGCTACAGTCGACAGGAACCTGGTGGCAGAATTGTCCTCCGTCTTCTTGGACAGCCTTTTCAGCACAGACACTGTAACTCAGGGCAGCCAGATGAATGGTTCTCCAAAACCCCGCTGA

Related Sequences

bmy_16719T0 SequenceType object (3)

Length: 566 aa      View alignments
>bmy_16719T0
MLDENLMGEINSHELGILKAFEPYFEILEVYSTKAKNYVNGHCTKYEPWQLIAWSVVWTLLIVWVYEFVFQPESLWSRFKKRCFKLIRKMPIIGRKIQDKLNKTKEDISKNMSFLKVDKDYVKALPSQGMSPAAVLEKLKEYSSMDVLWQEGKASGAVYSGEKELTELLVKAYGDFAWSNPLHPDIFPGLRKIEAEIVRMACSLFSGGPDSCGCVTSGGTESILMACSLLVHVAPQSAHAAFDKAANYFGMKIKRVPLNKVMEVDVRAMERAISRNTAMLVCSAPQFPHGVIDPVPDVAKLAVKYKIPLHVDACLGGFLIVFMEKAGYPLEQPFDFRVKGVTSISADTHKYGYAPKGSSVVLYSDKKYRHYQFFVDTDWQGGIYASPTIAGSRPGGISAACWAALMYFGESGYVEATKQIIKTTRFLKSELENIKGIFVFGNPQLSVIALGSHDFDIYRLFNLMNAKGWSLNQLQFPPSIHFCITLVHTRKRVAIQFLKDIRESVTQIMKNPKAKTTGMGAIYGMAQATVDRNLVAELSSVFLDSLFSTDTVTQGSQMNGSPKPR*