Part of scaffold_1332 (Scaffold)

For more information consult the page for scaffold_1332 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ASCC1 ENSTTRG00000009744 (Bottlenosed dolphin)

Gene Details

activating signal cointegrator 1 complex subunit 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009236, Bottlenosed dolphin)

Protein Percentage 93.06%
cDNA percentage 94.41%
Ka/Ks Ratio 0.32071 (Ka = 0.0389, Ks = 0.1212)

ASCC1 ENSBTAG00000000392 (Cow)

Gene Details

activating signal cointegrator 1 complex subunit 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000000504, Cow)

Protein Percentage 90.75%
cDNA percentage 90.37%
Ka/Ks Ratio 0.2063 (Ka = 0.0547, Ks = 0.2652)

ASCC1  (Minke Whale)

Gene Details

activating signal cointegrator 1 complex subunit 1

External Links

Gene match (Identifier: BACU019612, Minke Whale)

Protein Percentage 91.91%
cDNA percentage 94.8%
Ka/Ks Ratio 0.60301 (Ka = 0.046, Ks = 0.0762)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 678 bp    Location:24319..12119   Strand:-
>bmy_16734
ATGCGCACTAGTCTGGTGCGGCCTGAGGAAATTTCCTCTTACACGCCCTCTGCGGCAGGCTCCTGTTTCTCCACCTACTTTCTCCATTTTACTAGTCCCTGCAGGTKGTGCTGGATAGTGAGGTATTTCACAGGACTGTTGTTTGGAGAAAGTATCATGGAAGTTCTGCGTCCACAGCTTATAAGAATTGGTGGACGGGTTTACAGGAAGAATCCCATCCAAGAGCAGACTTATCAACATGAAGACGAAGATGATGACTGTTATCAAGGTCTCGTGGAGTGTGCAGAAGAGTCCTGTGAAGGCTATGAGGTGGTGCAGACCCCACAAGGTTTCCGGTGTACTGTGAAGGCCCCCAGCCTGCTCTACAAGCATATAGTTGGAAAGAGAGGCGACACTAGGAAGAAACTAGAAGTGGAGACCAAAACTTCCATAAGCATTCCTAAGCCTGGACAAGAAGGAGAARTTGTAATCACTGGCCAGCATCGAAGTGGTGTAATTTCAGCCCGAACTCGGATTGATGTTCTTTTGCTCACTTTTAGAAGAAAGCAGCCTTTCACTCACTTTCTAGCCTTTTTCCTCAATGACGCTGAGGTTCAGGAGCGATTTCTGAAGTTCCAGGAGGAAGTACTGGAGAAGTGCTCCATGGTAAGCAGCAAACAGAACAAAACAAAAAGTTAA

Related Sequences

bmy_16734T0 Protein

Length: 226 aa      View alignments
>bmy_16734T0
MRTSLVRPEEISSYTPSAAGSCFSTYFLHFTSPCRXCWIVRYFTGLLFGESIMEVLRPQLIRIGGRVYRKNPIQEQTYQHEDEDDDCYQGLVECAEESCEGYEVVQTPQGFRCTVKAPSLLYKHIVGKRGDTRKKLEVETKTSISIPKPGQEGEXVITGQHRSGVISARTRIDVLLLTFRRKQPFTHFLAFFLNDAEVQERFLKFQEEVLEKCSMVSSKQNKTKS*