Sequence detailsbmy_16750 (Coding sequence)

Part of scaffold_1402 (SequenceType object (1))

For more information consult the page for scaffold_1402 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

STX3ENSTTRG00000009417 (Bottlenosed dolphin)

Gene Details

syntaxin 3

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008925, Bottlenosed dolphin)

Protein Percentage 85.81%
cDNA percentage 90.2%
Ka/Ks Ratio 0.57711 (Ka = 0.0944, Ks = 0.1635)

STX3ENSBTAG00000012820 (Cow)

Gene Details

syntaxin-3

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000017032, Cow)

Protein Percentage 87.81%
cDNA percentage 88.05%
Ka/Ks Ratio 0.1798 (Ka = 0.0793, Ks = 0.441)

Additional orthologs identified in other species via the OPTIC pipeline.

STX3 (Human)   Stx3 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1320 bp    Location:51539..33255   Strand:-
Raw sequence 
>bmy_16750
ATGCTGCTAAAAGTGAAGCAGTATGAAGAAGCCAAAAACATTGTTGTCTTAGCTCTAATGGAAAAAGCACCCCAGTCGGACTCTGGAGAGCATGAATTATTCACCAGAAGAAAGGGCTGCCGGAAGCTGCGTATTGAGTTGTTTCTGTTTGTTGACTGTGGCCGTGTTGATGTGCCCCTCATTGTGGAAGTGAGGCAGGTAGATGTGGTGGGTTTTGAGGTCTCTTTGGCATGTGCTGCTCCCTGCATATGCACTGGCACCGCAGCAGAGGCCGTGGTGCCAGGACAGCCGGTGCCTTTGAAGAGGGAGCCAAGGCTGAACTTAATGCTCAGGCAGCAGCATCCTGGGACGATCGAGGAAACTCGATTCAACATTGACAAGATCTCAGAGCACGTGGAGGAAGCTAAGAAGCTCTACAGTATCATTCTGTCTGCACCCATTCCAGAGCCAAAAACCAAGGATAACCTGGAGCAGCTCACGACTGAGATCAAGAAAAGAGCCAACAATGTCCGGAACAAACTGAAGAGCATGGAGAGGCATATTGAAGAAGACGAGGTCCGGTCGTCAGCAGACCTTCGGATTCGGAAATCCCAGCACTCCGTCCTCTCCCGGAAGTTTGTGGAGGTGATGACCAAATACAACGAGGCTCAGATGGACTTCCGTGAACGCAGCAAAGGGCGAATCCAGCGGCAGCTCGAGATCACCGGCAGAAAGACAACAGATGAGGAGCTGGAGGAGATGCTGGAGAGTGGGAACCCTGCCATCTTCACCTCGGGGATCATCGACTCTCAGATTTCCAAGCAAGCCCTCAGTGAGATCGAGGGACGGCACAAGGACATCGTGAGGCTGGAGAGCAGCATCAAGGAGCTTCACGACATGTTCATGGACATCGCCGTGCTGGTGGAGAACCAGGGTGAGATGTTAGATAACATAGAGTTGAATGTCATGCACACGGTGGACCACGTGGAGAAGGCTCGGGAGGAGACAAAAAGAGCCGTGAAGTACCAGGGTCAGGCCCGGAAGGGAGCCATGATTGATCGTATTGAGAATAACATGGACCAGTCAGTGGGCTTCGTGGAGCGGGCCGTGGCAGATACCAAAAAGGCTGTCAAGTATCAGAGTGAAGCTCGGAGGAAATTGATAATTATCATTGTGGTAGTGGTTGTGTTGCTGGGCATTTTAGCGTTGGTTATTGGACTTTCCGTTGGGCTGAATCCTCACAGATGGATCTTCACCTGGCATTTTCAATTCTTCCTCCACCTCTGTGGTGCCATCCCTTCTCCGCTGCAGATTCCTCAAAAGCTCTTCTTTCCATTATGA

Related Sequences

bmy_16750T0 SequenceType object (3)

Length: 440 aa      View alignments
>bmy_16750T0
MLLKVKQYEEAKNIVVLALMEKAPQSDSGEHELFTRRKGCRKLRIELFLFVDCGRVDVPLIVEVRQVDVVGFEVSLACAAPCICTGTAAEAVVPGQPVPLKREPRLNLMLRQQHPGTIEETRFNIDKISEHVEEAKKLYSIILSAPIPEPKTKDNLEQLTTEIKKRANNVRNKLKSMERHIEEDEVRSSADLRIRKSQHSVLSRKFVEVMTKYNEAQMDFRERSKGRIQRQLEITGRKTTDEELEEMLESGNPAIFTSGIIDSQISKQALSEIEGRHKDIVRLESSIKELHDMFMDIAVLVENQGEMLDNIELNVMHTVDHVEKAREETKRAVKYQGQARKGAMIDRIENNMDQSVGFVERAVADTKKAVKYQSEARRKLIIIIVVVVVLLGILALVIGLSVGLNPHRWIFTWHFQFFLHLCGAIPSPLQIPQKLFFPL*