Part of scaffold_1402 (Scaffold)

For more information consult the page for scaffold_1402 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PATL1 ENSTTRG00000009389 (Bottlenosed dolphin)

Gene Details

protein associated with topoisomerase II homolog 1 (yeast)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008905, Bottlenosed dolphin)

Protein Percentage 83.05%
cDNA percentage 83.56%
Ka/Ks Ratio 0.50388 (Ka = 0.0071, Ks = 0.0141)

PATL1 ENSBTAG00000005913 (Cow)

Gene Details

protein PAT1 homolog 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000007768, Cow)

Protein Percentage 96.87%
cDNA percentage 93.73%
Ka/Ks Ratio 0.08031 (Ka = 0.0157, Ks = 0.1954)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2301 bp    Location:172193..206151   Strand:+
>bmy_16752
TCTTTGGAGGATTGTCCTCTGGATGAAGATGAAGATGCATTTCAGGGCCTGGGAGAGGAAGATGAAGAGATTGATCAATTCAATGATGATACATTTGGGTCAGGTGCAGTTGATGATGATTGGCAGGAAGCACATGAGCGCCTGGCTGAGTTGGAAGAGAAGCTGCCTGTGGCAGTTAATGAACAAACAGGCAATGGAGAAAGGGATGAGATGGACTTGTTGGGTGATCATGAGGAGAATCTGGCAGAAAGGCTCAGTAAGATGGTGATTGAAAATGAACTAGAAGATCCAGCTATCATGAGGGCAGTACAGACCAGACCAGTGTTGCAACCCCGACCAGGAAGTCTCAATTCCAGCATCTGGGATGGATCTGAAGTTCTGAGGCGAATCCGAGGACCACTGCTTGCTCAGGAAATGCCTACAGTGTCTGTGTTAGAATATGCCTTGCCTCAGAGGCCCCCACAGGGCCCAGAAGATGATCGGGACGTTTCTGAGCGTGCATTACCAAGGCGGTCAACTTCGCCTATCATTGGGAGTCCTCCTGTTAGAGCTGTCCCCATAGGCACCCCACCTAAGCAGATGGCTGTACCCAGCTTCAACCAACAGATTCTGTGTCCGAAGCCTGTCCATGTTCGACCCCCAATGCCACCACGCTATCCTGCTCCCTACGGTGAGAGGATGTCTCCAAACCAGCTCTGCAGTGTCCCGAACTCTTCCCTACTGGGTCACCCTTTCCCTCCTAGTGTTCCTCCTGTTCTCAGCCCCCTCCAGAGAGCACAGCTTCTTGGAGGAGCACAGCTACAGCCTGGACGGATGTCTCCCAGCCAGTTTGCACGGGTCCCTGGATTTGTTGGTAGTCCACTTGCTGCCATGAATCCCAAGTTGCTGCAAGGGCGAGTTGGGCAGATGCTTCCCCCAGCACCAGGCTTCCGTGCCTTCTTTAGTGCTCCAGCCCCCGCTACACCGCCGCCTCCTCAGCAGCACCCTCCTGGCCCAGGGCCTCACCTGCAAAACCTAAGATCACAGGCCCCAATGTTTAGACCAGACACAACCCACCTTCATCCACAGCACCGTCGACTCTTGCATCAGAGACAGCAACAGAATAGAAATCAGCATCGGAATCTCAATGGTGCAGGAGATAGAGGAAGTCACCGGAGCAGTCATCAGGATCATCTCCGAAAGGATCCATATGCCAATCTCATGTTGCAGCGAGAAAAAGATTGGGTCTCTAAAATCCAGATGATGCAGCTGCAAAGCACTGATCCCTACCTGGATGATTTTTATTACCAGAATTATTTTGAAAAACTGGAGAAACTGTCAGCTGCTGAAGAAGTGCAAGGTGATGGCCCAAAAAAGGAGCGCACCAAGCTCATTACCCCTCAGGTGGCCAAACTGGAGCACGCCTATAAGCCAGTGCAGTTTGAGGGCTCTTTGGGAAAGCTTACTGTCTCTAGTGTGAATAATCCCCGAAAAATGATTGATGCTGTTGTGACATCTCGGAGTGAGGATGATGAGACAAAAGAAAAACAGGTTCGGGACAAAAGACGAAAAACCCTTGTCATAATTGAGAAGACCTATAGTTTACTCCTTGATGTGGAGGATTATGAAAGGCGTTACCTCCTAAGTCTGGAAGAAGAGCGACCTGCCCTGATGGATGAAAGAAAGCACAAAATTTGTAGCATGTATGACAACTTAAGGGGGAAATTGCCTGGACAGGAGAGGCCCAGTGATGACCACTTTGTACAGATCATGTGCATCAGAAAAGGGAAGAGAATGGTTGCCCGTATTCTTCCTTTCCTCTCCACAGAGCAAGCAGCTGACATTCTCATGACAACAGCCAGGAACCTCCCTTTTCTTATCAAGAAGGATGCACAAGATGAGGTGCTGCCATGCTTATTGAGTCCCTTCTCTCTTCTCCTCTATCATCTTCCATCAGTGACTGTCACCAGCCTTCTGCAACAGCTAATGAACCTACCTCAGAGTGCAGCTGCACCAGCACCCGCCAATCCTCACCTCACTGCTGTGCTCCAGAACAAGTTCGGCCTGTCACTGCTCCTCGTCGTCCTGAGCCGTGGGGAAGACCTGCAGAGCTCAGACCCCACTTCAGAATCAACGCAAAGCAACCAGTGGACGGAGGTGATGTTCATGGCAACCCGAGAACTTCTGCGGATTCCCCAGGCAGCCCTGGCCAAGCCAATCTCTATACCCACAAATCTAGTATCCCTGTTTTCTCGTTATGTTGACCGACAGAAACTGAACTTGCTGGAGACAAAACTGCAGCTAGTTCAGGGGATACGATAA

Related Sequences

bmy_16752T0 Protein

Length: 767 aa      View alignments
>bmy_16752T0
SLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHERLAELEEKLPVAVNEQTGNGERDEMDLLGDHEENLAERLSKMVIENELEDPAIMRAVQTRPVLQPRPGSLNSSIWDGSEVLRRIRGPLLAQEMPTVSVLEYALPQRPPQGPEDDRDVSERALPRRSTSPIIGSPPVRAVPIGTPPKQMAVPSFNQQILCPKPVHVRPPMPPRYPAPYGERMSPNQLCSVPNSSLLGHPFPPSVPPVLSPLQRAQLLGGAQLQPGRMSPSQFARVPGFVGSPLAAMNPKLLQGRVGQMLPPAPGFRAFFSAPAPATPPPPQQHPPGPGPHLQNLRSQAPMFRPDTTHLHPQHRRLLHQRQQQNRNQHRNLNGAGDRGSHRSSHQDHLRKDPYANLMLQREKDWVSKIQMMQLQSTDPYLDDFYYQNYFEKLEKLSAAEEVQGDGPKKERTKLITPQVAKLEHAYKPVQFEGSLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLVIIEKTYSLLLDVEDYERRYLLSLEEERPALMDERKHKICSMYDNLRGKLPGQERPSDDHFVQIMCIRKGKRMVARILPFLSTEQAADILMTTARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPSVTVTSLLQQLMNLPQSAAAPAPANPHLTAVLQNKFGLSLLLVVLSRGEDLQSSDPTSESTQSNQWTEVMFMATRELLRIPQAALAKPISIPTNLVSLFSRYVDRQKLNLLETKLQLVQGIR*